Lysobacter sp. TY2-98: DWG18_09710
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Entry
DWG18_09710 CDS
T05586
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lyt
Lysobacter sp. TY2-98
Pathway
lyt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lyt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DWG18_09710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lyt03021
]
DWG18_09710
03400 DNA repair and recombination proteins [BR:
lyt03400
]
DWG18_09710
Enzymes [BR:
lyt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DWG18_09710
Transcription machinery [BR:
lyt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DWG18_09710
DNA repair and recombination proteins [BR:
lyt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DWG18_09710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AXK72520
UniProt:
A0A345ZL95
LinkDB
All DBs
Position
complement(2010501..2011499)
Genome browser
AA seq
332 aa
AA seq
DB search
MTVTANQVLRPRGPQIERLTGNRAKVVIEPLERGYGHTLGNALRRVLLSSIPGFAITEVE
IDGVLHEYTTVEGLEEDVLEVLLNLKDVAIRMHTGDSAMLSLNKSGPGVITAGDIRTDHN
VEIINPEHVVAHLTKDTALNMRLKIERGYGYQPAAARRRPDEETRAIGRLMLDASFSPVR
RVAYAVEAARVEQRTDLDKLVLDIETNGTIDAEEAVRTAADILTDQLSVFGDFTHRERGA
AKPATGGVDPLLLRPIDDLELTVRSANCLKAENIYYVGDLIQKTEVELLKTPNLGKKSLT
EIKEVLAQRGLALGMRLENWPPAGVASHGMMG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgacggttaccgccaaccaggtattgcgcccgcgtggtccccagatcgagcgcctgacc
ggcaatcgcgccaaggtcgtgatcgagccgctggagcgcggctacggccacaccctcggc
aatgcgctgcgccgcgtcctgctttcgtcgatccccgggttcgcaattaccgaggtggag
atcgatggcgtgctccacgagtacaccacggtcgaaggcctcgaagaggatgtgctcgag
gttctgctgaatctcaaggacgtcgcgattcgcatgcacacgggtgacagcgcgatgctg
tcgctcaacaagtcgggcccgggcgtcatcaccgccggtgacatccgcaccgaccacaac
gtcgagatcatcaatccggaacacgttgtcgcgcacctgaccaaggacaccgcgctcaac
atgcgtctgaagatcgagcgtggctatggctaccagccggccgccgcgcgtcgccgtccg
gacgaggagacccgcgccatcggtcgcctgatgctggatgcgtcgttctcgccggtccgt
cgcgttgcctacgctgtggaagctgcgcgcgtcgaacagcgcaccgacctcgacaagctg
gtgctcgacatcgaaaccaacggcacgatcgatgccgaggaagccgtccgcaccgcggcc
gacatcctcaccgaccagctgtcggtgttcggcgacttcacccaccgcgagcgcggtgcg
gcgaagccggcgaccggtggcgttgacccgctgctgctgcgtccgatcgacgatctcgaa
ctgacggtgcgttcggccaactgcctcaaggccgagaacatctactacgtcggcgacctg
atccagaagaccgaagtcgagctgctcaagaccccgaacctgggcaagaagtcgctcacc
gagatcaaggaagtgctcgcgcagcgcggtcttgccctcggcatgcgtctggagaactgg
ccgccggccggtgtcgcctcgcacgggatgatgggctga
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