Lysobacter sp. TY2-98: DWG18_12495
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Entry
DWG18_12495 CDS
T05586
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
lyt
Lysobacter sp. TY2-98
Pathway
lyt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lyt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DWG18_12495 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyt03400
]
DWG18_12495 (xth)
Enzymes [BR:
lyt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
DWG18_12495 (xth)
DNA repair and recombination proteins [BR:
lyt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
DWG18_12495 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AXK73015
UniProt:
A0A345ZMP0
LinkDB
All DBs
Position
complement(2564437..2565258)
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AA seq
273 aa
AA seq
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MRVISFNANGWRSAAKKGFIDWLREKDADILCVQETKAQEHQLRLPELIPPGYHANFRDA
TTKKGYSGVAIYSKREPDEIRTGLGRVDFDEEGRYIEARFGDLSVVSVYVPSGTSGDERQ
GFKIDVMDWFAPILREWAASGRKYIVCGDWNIVRSRRDITNWTGNQKNTGCLPHERAWLN
SLIADQHGDGSPCADDGGWVDSFRVVKPDESGEYTWWSNRGQARANNVGWRIDYQLVTPN
LRDAIRHCETHREPRFSDHAPYIVDYDYPEYAA
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcatcagcttcaacgccaacggctggcgttccgccgccaagaagggcttcatc
gactggctgcgcgagaaggacgccgacatcctctgcgtgcaggagaccaaggcgcaggag
caccagctgcgcctgcccgagctgatcccgccgggttaccacgcgaacttccgcgatgcg
acgacgaagaagggctacagcggcgtcgcgatctattccaagcgcgaacccgacgagatc
cgcacgggcctgggccgcgtcgacttcgacgaggaaggccgctacatcgaagcgcgcttc
ggcgatctctccgtcgtctccgtctacgtgccgtccggcaccagtggcgacgagcgccag
ggcttcaagatcgacgtcatggactggttcgcgccgatcctgcgcgaatgggccgcgagc
ggtcgcaagtacatcgtctgcggcgactggaacatcgtgcgcagccgtcgcgacatcacc
aactggaccggtaaccagaagaacaccggctgcctcccgcacgagcgcgcttggttgaat
tcgctcatcgccgatcaacacggcgacggctcgccctgcgccgacgacggcggctgggtc
gacagcttccgcgtcgtcaaaccggatgaatccggcgaatacacgtggtggagcaaccgc
ggacaggcccgcgccaacaacgtaggctggcgcatcgattaccagctggtcacgccgaac
ctgcgcgacgcgatccgccactgcgaaacgcatcgcgaaccccggttctccgaccacgcg
ccctacatcgtcgactacgactacccggagtacgccgcttga
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