Lysinibacillus sp. 2017: DCE79_03020
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Entry
DCE79_03020 CDS
T05455
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
lyz
Lysinibacillus sp. 2017
Pathway
lyz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lyz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DCE79_03020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyz03400
]
DCE79_03020
DNA repair and recombination proteins [BR:
lyz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DCE79_03020
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DCE79_03020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
P-loop_SecA
HEM4
AAA_7
AAA_30
AAA_19
CsgA
UB2H
AAA_22
UvrD-helicase
AAA
AAA_16
AAA_25
TrwB_AAD_bind
COG5_N
Motif
Other DBs
NCBI-ProteinID:
AWE06418
UniProt:
A0A2S1GYP5
LinkDB
All DBs
Position
694587..696569
Genome browser
AA seq
660 aa
AA seq
DB search
MTEIFTIQSEYQPAGDQPEAIKQLVQGLKDGKHHQTLLGATGTGKTFTISNVIKEVNKPT
LVMAHNKTLAGQLYSEFKEFFPNNAVEYFVSYYDYFQPEAYVPQTDTYIEKDSSINDEID
KLRHSATSALFERNDVIVIASVSCIYGLGNPEEYWEMVVSIRTGMELERNELLRKLVDIQ
YERNDINFTRGTFRVRGDVVEIFPASKDEHCIRVEFFGDEVDRIREVDALTGEILGERQH
IAIFPASHFVTRDEKMKIAIENIEKELAERLKLLRSEDRLLEAQRLEQRTNYDLEMMKEM
GFCSGIENYSRHLTLREKGATPYTLIDYFPKDFLLVVDESHVTLPQVRGMYNGDQARKGV
LVEHGFRLPSALDNRPLMFDEFQSKVSQAIYVSATPGPYELEHTPEMVQQIIRPTGLLDP
TIDVRPSEGQIDDLIDEIHERIRQNERVLVTTLTKKMSEDLSKYLKEMGLKVEYLHSEIK
TLERIEIIRELRKGTYDVLVGINLLREGLDIPEVSLVTILDADKEGFLRSERSLIQTMGR
AARNANGHVIMYADNMTDSMTKAISETKRRREIQMAYNEKHGITPKTIIKKIPEIIRATQ
AAEQEETYITKITGGKKLTKKELEKFVETLQVEMKEAAKALDFERAAELRDMIFELKVEG
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaatatttacaatccagtccgaatatcaacccgctggcgatcaaccagaagcg
attaaacagcttgtacaaggcttaaaagatggaaaacatcatcaaacattgcttggtgca
acaggtaccggtaagacgtttacgatttccaatgtgattaaagaagtgaataaaccaacc
ctcgtcatggcacacaacaagacgcttgcggggcaattatatagtgagtttaaagaattt
ttcccaaataatgccgttgaatatttcgttagttactatgattatttccaaccagaagcg
tatgtaccacaaactgatacgtatatcgaaaaggattcaagcattaatgatgaaattgat
aagctacgacattcggcgacatcggcattattcgaacgaaatgatgtcattgttattgcg
tcggtctcatgtatttatggcttagggaatccagaagaatattgggaaatggttgtatcg
attcgtacgggcatggagcttgaacgaaatgagttgttacggaagcttgttgacattcaa
tatgaacgtaatgatattaactttacacgtggtacattccgcgtacgtggggacgttgtt
gagattttcccagcatctaaagatgaacattgcattcgtgtagagtttttcggtgatgaa
gtcgatcgtattcgtgaagtggatgcattaacaggcgaaattttaggtgaacgtcagcac
attgcgattttcccagcatcccacttcgttacccgtgacgagaagatgaaaattgccatt
gaaaatattgaaaaagaactagcagaacgactcaagctacttcgttcagaggatcgtcta
ttagaagcccagcgtttagagcagcgcacgaattatgacttagaaatgatgaaggaaatg
ggcttctgctctgggattgaaaactattcgcgtcatttaacattacgtgaaaaaggggca
accccgtatacattaattgattatttccctaaggattttttactcgttgtcgatgaaagt
cacgttaccttaccgcaagtgcgcgggatgtataacggggaccaagcgcgtaaaggcgtc
cttgtcgaacacggtttccgcttaccttcagcgctagacaaccgccctttaatgtttgac
gaattccagtcaaaggttagccaagccatatatgtttcggcaacaccaggaccgtacgaa
ttagagcatacacccgaaatggttcaacaaattattcgtccgactggtttacttgatcca
acgattgatgtacgtccaagtgaagggcaaattgatgatttaatcgatgaaatacacgaa
cgtattcgtcaaaacgaacgtgtactcgtgacgacattaacgaaaaaaatgtccgaggat
ttatcgaagtatttgaaggaaatgggcttaaaagttgaatatttacactctgaaattaag
acgcttgagcggattgaaattattcgagagctgcgtaaagggacgtatgatgtgcttgta
gggattaacttactgcgagaagggctcgatattccggaagtgtcactcgtgacgatttta
gatgcggataaagaagggttccttcgttcagaacgttcactcattcaaacgatggggcgt
gcggcgcgtaacgccaatggtcacgtcattatgtatgccgataatatgaccgattcgatg
acgaaggcgatttctgaaacgaaacgtcgtcgagagattcaaatggcatacaacgaaaaa
cacggcattacaccgaaaacaatcattaagaaaattcctgagattattcgtgcgacacag
gctgccgaacaggaagaaacgtatattacgaaaataacaggcggcaaaaagctgacaaaa
aaagagctagagaagtttgtagagacattgcaagttgagatgaaggaagcggcaaaggca
ctcgacttcgaacgtgcggcagagcttcgtgacatgatattcgaattgaaagtagaaggg
tga
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