Lysinibacillus sp. 2017: DCE79_15460
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Entry
DCE79_15460 CDS
T05455
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lyz
Lysinibacillus sp. 2017
Brite
KEGG Orthology (KO) [BR:
lyz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lyz03019
]
DCE79_15460
Messenger RNA biogenesis [BR:
lyz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DCE79_15460
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
AWE08683
UniProt:
A0A2S1H4U4
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All DBs
Position
complement(3163880..3164818)
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AA seq
312 aa
AA seq
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MNGITKLQPGDQVDQFLLIKEAKKGVTTVGKPFMSLLLQDRSGDVEAKLWDTNEEHENLY
RAQVIVKVGGEIHDYRGKNQLRVKQIRPVREDEGVQISDLLPTSAIPKEELMESLNEFFF
QIKNPNISRITRHIIKKHQESLMIFPAATKNHHDYASGLIDHVVSMLKLSSAICDLYPTL
NRDLLYAGVILHDIGKVIELSGPVGTMYTVEGNLLGHISIMVNEIGFAAAELKIEGEEVM
LLQHLVLSHHGKEEWGSPKKPMIQEAEMLHYIDNIDAKMNMLTRALDKTQPGEFTERLFP
LDNRSFYKPTFE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
gtgaatggaattacaaaactccaacctggagatcaggtagaccagtttttattaattaaa
gaggcgaaaaaaggagtaacgacagtaggtaagccatttatgtcactactactacaagat
agaagtggagatgttgaggcaaagctttgggatacaaacgaagaacatgaaaatttatat
cgtgcacaagtaattgtaaaagttggcggagagattcatgattaccgaggtaaaaatcaa
ttacgcgtcaaacaaattcgtcccgttcgagaagatgaaggcgtacaaattagcgattta
ttacctacatcggcgattcctaaagaagaattaatggaatcattaaacgaatttttcttc
caaattaaaaatccaaacatttcacgtattacacgtcatattattaaaaagcatcaagaa
agcttaatgattttcccagcagcaacgaaaaatcaccatgactacgcatcggggttaatt
gaccatgtcgtatccatgctgaaattaagtagtgccatttgtgatttatatccaacgtta
aatcgcgatcttttatacgcgggtgttattttacatgatatcgggaaagtcatcgaatta
agtggtccagttggtacgatgtatacagtcgaaggaaacttacttggtcatatttcgatt
atggtcaacgaaattggctttgcagcagcagaattaaaaattgaaggtgaagaagtgatg
ttacttcaacacttagtgttatctcaccacgggaaagaagagtggggtagcccgaaaaag
ccaatgattcaggaagcagaaatgttacattatattgataatattgatgcaaaaatgaac
atgttaacacgtgcattagataaaacacaaccgggtgaatttacagagcgtttattccca
ttggataaccgttcattctataaaccaacattcgaataa
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