Martelella sp. AD-3: AZF01_10540
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Entry
AZF01_10540 CDS
T04332
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
maad
Martelella sp. AD-3
Pathway
maad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AZF01_10540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maad03019
]
AZF01_10540
03400 DNA repair and recombination proteins [BR:
maad03400
]
AZF01_10540
Enzymes [BR:
maad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AZF01_10540
Messenger RNA biogenesis [BR:
maad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AZF01_10540
DNA repair and recombination proteins [BR:
maad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AZF01_10540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
AMM84738
UniProt:
A0A127CIS5
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All DBs
Position
2274275..2276095
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AA seq
606 aa
AA seq
DB search
MPDCTLAEPLAVLKEIYGYSKFRGKQAAVIDQVVSGGDAVVLFPTGAGKSLCYQVPALCR
QGVGVVISPLIALMRDQVEALKQLGVRAAAMNSSLSQEDFIVTRRALARGELDLLYVTPE
RVATGGFMDMMRDLQIALFAIDEAHCVSQWGHDFRPEYRALDRLAEAFPGVPRMALTATA
DPHTREDIIDRLALRDAAVFTTSFDRPNITYEIVERAQPRRQLLDFLSRHKGESGIVYCL
SRAKVEETAEWLNGEGIRALAYHAGMTREARDANQDAFLKEDELCLVATVAFGMGIDKPD
VRYVAHLDLPGSVEAYYQETGRAGRDGLPADAWMVYGMADVTQRGRMIDRSAAADEIKRV
ERAKLNALLGICETADCRRQAILAHFGERHEGHCGNCDTCLSPVETWDGTEAAIKAMAAI
YRTGERFGAGHLIDVLTGNETERTERFGHATMPVFGAGKDIAPKTWQSVYRQLLAKGLIR
VDHEAFGALKLEPGARAVFRHELSLRFRVDRAPKGKASTGTRRRNDAKAALSEQDQSLFE
ALRATRTALARELAVPPYVIFPDTTLIALASHRPGSAEAMLEIQGVGKTKLQRYGAEFLD
TIRAHG
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
ttgcccgattgcaccctcgccgaaccgctcgccgtcctcaaggaaatctacggctactcg
aaatttcgcggaaaacaggccgccgtgatcgatcaggtcgtctcaggcggcgatgccgtg
gttctgtttccgacgggggccggcaagtcgctctgctatcaggttcccgccctctgccgc
cagggcgtcggcgtggtgatctcgccgctgatcgcgctgatgcgcgaccaggtcgaggcg
ctgaaacagcttggcgtccgggcagctgcgatgaactcctcgctgtcgcaggaggatttc
atcgtgacacgacgggcgctggcgcgtggcgagctcgaccttctctacgtcaccccggaa
cgcgtcgcaacgggcggcttcatggatatgatgcgcgaccttcagattgcgctcttcgcc
attgacgaggcccattgcgtctcccagtggggtcatgatttccgtccggaataccgcgcg
ctcgacaggctggcggaggcctttcccggcgtgccgcgcatggctctgacggcaacggcc
gatccccatacccgcgaagacatcatcgatcgcctcgcgctgcgagacgcggcggtgttc
accacctcattcgaccggcccaacatcacctatgagatcgtcgagcgggcccagccgcgc
cgccagcttcttgatttcctctcccgccacaagggcgaaagcggcatcgtctactgcctc
tcgcgcgccaaggtggaggaaacggcggaatggctgaatggcgagggcatcagggcgctc
gcctatcacgccggcatgacgcgggaggcccgcgacgccaatcaggacgcgttcctgaag
gaggacgagctttgcctcgtggccaccgtggccttcggcatgggcatcgacaagccggat
gtgcgctatgtcgcccatctcgacctgccgggctccgtcgaggcctattaccaggagacc
gggcgcgcgggacgcgacggtcttccggccgatgcctggatggtctacggcatggccgac
gtcacgcagcgcgggcgcatgatcgatcgctccgccgccgccgatgagatcaagcgcgtc
gaacgcgccaaactgaatgcgctgctcggcatctgcgagacggcggactgccgtcggcag
gcgatccttgcccatttcggcgagcggcacgaaggccattgcggcaattgcgacacctgc
ctgtcgccggtcgagacatgggacggcacggaagccgcgatcaaggccatggccgcgatc
tatcgcaccggcgagcgcttcggcgccggacacctgatcgacgttctgacgggcaacgag
accgagcgcacggagcgcttcggccacgcgaccatgcccgtcttcggcgcgggcaaggat
atcgcgcccaagacatggcaatcggtctatcggcaattgcttgccaaggggctgatccgg
gtcgatcacgaggcctttggcgcgctgaagctggaacccggcgcgcgtgcggttttccgg
cacgagctatcgctgcgcttccgggtcgaccgggcgccgaagggcaaggcctctaccggt
acgcgcagacgcaacgacgcgaaggccgcgctttccgaacaggatcagtccctgttcgag
gcgctgcgcgccacccgcacggcgcttgccagggaacttgccgtgccgccctatgtgatc
tttcccgatacgacgctgatcgcgctagccagtcatcgaccgggttccgccgaagcgatg
ctcgagatccagggcgtcggcaagaccaagctgcagcgttatggcgccgaatttctcgac
acgatccgcgcgcacggctga
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