KEGG   Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300: MMASJCM_1059Help
Entry
MMASJCM_1059      CDS       T03694                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
mabl  Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300
Pathway
mabl03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:mabl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    MMASJCM_1059
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mabl03400]
    MMASJCM_1059
Enzymes [BR:mabl01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     MMASJCM_1059
DNA repair and recombination proteins [BR:mabl03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     MMASJCM_1059
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: LigD_N DNA_ligase_A_M DNA_ligase_A_C RNA_ligase DNA_primase_S
Motif
Other DBs
NCBI-ProteinID: BAP95835
LinkDB All DBs
Position
1066791..1069142
Genome map
AA seq 783 aa AA seqDB search
MERISPVWPTGAAESATSGPGATAFVRLSNAEKVLYPATDTGPATTKADVFGYYTAIAPF
MLPHIAGRPVTRKRWPNGVDQPSFFEKDLASSAPDWLPRRRIEHKSRYVSYPLIDTSVAL
AWIAQQAALEVHVPQWRFAGENPGPATRLVFDLDPGEGVGMAQLAEVARAIRDVLADTGL
TTFPVTSGSKGLHLYVPLAQPASSSGAVAVAKKVAVQLEQAMPDLVTATMTRQLRAGKVF
VDWSQNSGSKTTVAPYSLRGRVVPTVAAPRTWEELDDPGLRQLRYDEVLRRAQRDGDLLA
GLDDVEIAEDRLSTYRSMRDPARTPEPVPAIKPEAGQNNSFVIQEHHATALHYDFRLERD
GVLVSWAVPKNLPLEPSVNHLAVHTEDHPLEYGSFEGTIPKGEYGAGEVTIWDSGTYDTE
KFIDPRDDSGADGGQKGEVIVTLHGKRITGRYALIRTNGKQWLAHRMKDQRPAGSMPAGL
APMLPTTGSVAGLTAEEWAFEGKWDGYRLILECDRGQLRALARSGRDVTAEFPALQRLAH
ELSDHRVVLDGEVVVPDQKGLPSFALLQNRTPGADIRFWAFDLLYLDGKSLLRTKYRDRR
RLLEVLVTGTESMTVPQQLSGDGAAALAYSQDQGWEGVVAKRLDSTYVPGRTQSWIKAKN
WSSQEVVIGGWRKGQGGRSSGIGALLMGIPVEGGLRYAGRVGTGFTERELSSLKERLEPL
HRAESPFDAPLSTAEAKDAQFVEPVLVAEVRYGDRTPGGILKHSSWRGLRTDKSVRDVEL
DLG
NT seq 2352 nt NT seq  +upstreamnt  +downstreamnt
atggaacgcatatccccagtatggcccaccggagccgcggagtcggcgacatccggcccc
ggggcaaccgcgttcgtccggctgtccaacgccgagaaagtgctgtacccggccacggat
accggcccggccaccaccaaagcagatgtcttcggctactacaccgcgatcgcccccttc
atgttgccgcatatcgcgggccggccggtcacccgcaagcggtggcccaacggcgttgac
cagccgtcgttcttcgaaaaggacctggcttcttcagcgcccgactggctgccgaggcgc
cgcatcgagcacaagtcccgctacgtcagctacccgctgatcgacacctcggtcgccttg
gcgtggatcgcgcagcaggcggcgctcgaggtgcacgtgccacagtggcgattcgccggt
gaaaatccaggtccggcaacccggttggtattcgacctggatcctggcgagggggtcggc
atggcccaactggcggaagtggccagggccatccgggatgtgctcgccgataccggtctg
acgacctttccggtgaccagcggaagcaagggcttgcacctgtacgtgccgctggcgcaa
ccggccagctcgtccggtgcggtcgctgtggcgaagaaggttgccgtccagttggagcag
gcgatgcccgacctggtgacggcgacgatgacccgacagctacgcgcgggcaaggtcttc
gtggattggagccagaacagcggttccaagacgacagtggcgccctactcattacgtggc
cgggtggtgccgaccgtcgccgcgccgcgcacgtgggaagaactggacgaccccggcctg
cgtcagctgcgatatgacgaagtgctgaggcgggcccagcgtgacggcgacctgctggcc
gggctcgacgatgtcgagatcgccgaggacaggctgtccacctatcgcagcatgcgcgat
cccgcacgcacgcctgaaccggtgccagcaatcaaacccgaagctgggcaaaataattca
tttgtcatccaggagcatcacgccaccgcgctgcactacgactttcggctggagcgcgat
ggcgtgctggtgtcgtgggcagtgcccaagaacctgcccctggaaccgtcggtcaatcat
ctcgcggtgcacaccgaggatcatccgctggagtacggctccttcgaaggcaccatcccg
aagggggagtacggggcgggtgaggtgacgatctgggactcgggaacttacgacaccgag
aagttcatcgacccgcgcgacgattcaggagccgacggcgggcaaaagggcgaggtcatt
gtcaccctccacggcaagcgaatcaccgggcggtatgcgctgattcgaaccaacggcaag
caatggctggcgcaccggatgaaggatcagcggcccgccggctcgatgcccgccggtctc
gcgccgatgttgccgaccaccgggtcggtagcgggtctgaccgccgaagaatgggcgttc
gaaggcaaatgggacggctatcggctgatcctggaatgcgatcgcggacagctcagagca
ttggcgcgcagcgggcgcgacgtgacggccgaattcccggcgttgcaacggcttgcgcat
gaactgtccgatcaccgggtcgtgctcgacggcgaggtggtggttccggatcagaagggc
ctgcccagctttgcgctgctgcagaacaggacaccgggtgccgacattaggttctgggcc
ttcgatctgctgtatctggacggaaaatcgttgttgcgtaccaagtatcgggaccgacgt
cgactgctcgaggtgctggttaccggcaccgaatcgatgacagtcccgcagcagttgagc
ggcgacggtgccgcggcccttgcgtactcgcaggatcaaggctgggagggggtggtggcc
aagaggctggattccacctacgttcccggccgaacacagtcttggatcaaggcgaagaac
tggagtagtcaagaggtcgtcatcggcggctggcgcaaggggcagggcggtcgcagtagc
ggaataggggccctgctcatgggaatacctgtcgagggtggtctgcgctatgcgggccgg
gtcggtaccggattcaccgagagggaactgtcatcgctgaaggagcgtctagagcccctg
caccgcgccgaatcgccctttgatgcgccgctgtccaccgccgaggccaaggatgcgcag
ttcgtcgagccggtgttggtggccgaagtccgatacggtgaccgcacaccgggcggaatt
ctgaagcactcaagttggcgcgggctgcgcaccgacaagtcagttcgcgacgtcgagctc
gatctcggatag

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