Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300: MMASJCM_3030
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Entry
MMASJCM_3030 CDS
T03694
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
mabl
Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300
Brite
KEGG Orthology (KO) [BR:
mabl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mabl03021
]
MMASJCM_3030
Transcription machinery [BR:
mabl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MMASJCM_3030
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
BAP97806
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Position
3048107..3049078
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AA seq
323 aa
AA seq
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MANATTRPARTTESEDLDAQSPAADLVRVYLNGIGKTALLTAEDEVELAKRIEAGLYAQH
LLDTKKRLGEARKKDLAVIVREGNAARSHLLEANLRLVVSLAKRYTGRGMPLLDLIQEGN
LGLIRAMEKFDYAKGFKFSTYATWWIRQAITRGMADQSRTIRLPVHLVEQVNKLARIKRE
LHQRLGREASDEELAEESGIPVEKIGDLLDHSRDPVSLDMPVGTDEEAPLGDFIEDTEAM
SAENAVIAELLHSDVRSVLATLDEREQQVIRLRYGLDDGQARTLDQIGKLFGLSRERVRQ
IEREVMAKLRHGDRAERLRSYAS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacgccaccacccgtccggcccgcaccaccgagtccgaggatctggacgcccag
agtccagccgccgatctcgttcgggtgtatttgaacggcattggcaagaccgccctgctc
acggcggaggacgaagtcgagctggccaaacggattgaggcggggctctacgcccagcac
cttctcgacaccaagaagcgtcttggcgaggcccgcaagaaggacctggccgtgatcgtg
cgggaaggcaacgcagcacgcagccatctgctggaggcgaacctgcgtctggtggtctcg
ctcgccaagcgctacaccggccgcggtatgcccctgctggatctcatccaggaaggcaac
ctgggcttgatccgcgccatggagaagttcgactacgccaagggcttcaagttctcgacg
tacgccacgtggtggatccgccaggccatcacccgcggcatggccgaccagagccgcacc
atccgcctccccgtgcacctggtggagcaggtgaacaagttggcacgcatcaagcgcgag
ctgcaccagcggctcggccgcgaggccagcgacgaggaacttgccgaagagtccggcatc
ccggtggaaaagatcggcgacctgctggaccacagccgcgatccggtgagcctggatatg
ccggtcggtaccgacgaggaagcaccgctgggtgatttcatcgaggacaccgaggccatg
tcggcggagaacgccgtcatcgctgagctgctgcactcggacgtgcgcagcgtgctggcc
acgctcgatgaacgcgaacagcaggtcattcggctgcggtacggcctcgatgacggacag
gctcggacgctggatcagatcggcaagctcttcgggctctcccgcgagcgggtgcgccag
atcgagcgcgaggtcatggcaaaactgcgccacggcgaccgcgcggagcgcctgcgttcg
tacgcgagctag
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