Macrococcus sp. IME1552: BHM04_00220
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Entry
BHM04_00220 CDS
T05070
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
macr
Macrococcus sp. IME1552
Pathway
macr03420
Nucleotide excision repair
macr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
macr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BHM04_00220
03430 Mismatch repair
BHM04_00220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
macr03400
]
BHM04_00220
Enzymes [BR:
macr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BHM04_00220
DNA repair and recombination proteins [BR:
macr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BHM04_00220
MMR (mismatch excision repair)
Other MMR factors
BHM04_00220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
UvrD-helicase
UvrD_C_2
DEAD
AAA_11
Mg_chelatase
AAA_5
nSTAND3
PhoH
Viral_helicase1
ResIII
bpMoxR
AAA_16
Intein_splicing
AAA_18
AAA
RuvB_N
Motif
Other DBs
NCBI-ProteinID:
ATD29712
LinkDB
All DBs
Position
47297..49369
Genome browser
AA seq
690 aa
AA seq
DB search
MNLKQSETKHLTAVHALIDIIQNKLTGELTKSTTELIEERRFAFEELGTEISDDAQIEYS
QVLPSLKLQEEIQVNRNKVTQQINKMKNRPYFGAVTLNDDEHETEKFYIGLNSLKDPSTG
DLIIYDWRTPIASTYYENQLGEISYNVPSVGTQVVDVLSRIQIVIEQGRLLDVFDSEIYI
GDDALQHLLVDSAKDKMKSIVTTIQQDQNAIIRMTSNHDILVLGPPGSGKTSIAMQRVAY
LLYLHRNKMTAEHMLFITPNEMFGDYISDVLPELGEAPINATSFFRLKDKMNRRHFHVES
LFQNIERMRHADDHARALFKIKNSKLLLQKMDQKIASIAVKNIKFNILTIGGTPFVTKEH
LSYLFYDKFGESPIDARLKKIQVELEPIYEEHLQQAIKDRTKALKKVTRYIGTDEELEKR
AKREKTKQYKVLKQYIKDIQFINIERIYLNILKSIDQKAYEATLNQFRNKQMYYEDIAPL
LYLSVKIKGLHRESMMQHIIIDEVQDYSVVQLAAISAVYPNARKTMLGDSNQIVHPAVTF
ELPDDINVIHLTKSYRSTVQITEFTKGLIGNNDTESLGVQGEDVLELDYEAFVNTVEALQ
SESVAIIARDVRHANKIAQTLKGCTLLTHDQYTFTKGKVIMPNYMAKGFEFSHVFIVGFN
QYDREQDQLLLYTIASRATRHLYLVGDIND
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
ttgaacttaaaacagagtgaaacgaaacatttaacagcagtgcatgctttaattgatatt
attcagaataaattaaccggagagctcacaaaatctacgactgaactcatcgaagaacgc
cgctttgcttttgaagagctcggtacagaaatttctgatgatgcgcagattgaatattcg
caagtactaccttctttaaaattacaagaagaaattcaggttaaccgaaataaggtcaca
cagcagattaataagatgaaaaatcgtccttattttggtgctgtcactttaaatgatgac
gagcatgaaacagaaaagttttatatcggattaaatagcctgaaggatccttcaacagga
gatctcataatctatgactggagaacaccgattgccagtacatattatgagaaccaactt
ggtgaaataagctataatgtgccgtctgtcggtacacaagtcgtagatgtgttgtcacgt
atacagattgttattgaacaagggcgtctgttagatgttttcgattcagaaatatatatt
ggtgatgatgcactgcagcatctgctcgttgatagtgcgaaagataagatgaaatctatc
gttacaacgattcagcaggatcagaatgcaattatacgcatgacttcaaatcatgatatt
ttagtgttaggaccaccaggatcaggtaaaacgtcgattgcaatgcagcgtgttgcctac
cttctatatttacatagaaataaaatgacagcagaacatatgctgtttattacaccgaat
gagatgttcggcgattatatatctgatgtattaccggagttaggagaagcaccgattaat
gcgacgagctttttcaggttaaaagataaaatgaatcgtcgtcactttcatgtcgaatcg
ttatttcaaaatattgagcgcatgcgtcatgcagatgatcacgcacgagcgttatttaaa
attaaaaatagtaagttactgttacaaaagatggatcaaaagattgcatcgattgcagtg
aaaaatattaaatttaatatattaacaattggaggcacaccttttgtaacgaaagagcat
ctatcttatttattttatgataaatttggtgaatctccgattgatgcacgacttaaaaaa
attcaggtagaattagagccgatttacgaggaacatttacagcaagcgataaaagacaga
acgaaagcattaaagaaagtaacgcgatatatcggtacagatgaagaacttgagaagcgt
gctaaacgtgaaaagacaaagcaatataaagtgctgaaacaatatattaaagatattcag
tttatcaatattgaacgtatttatctcaatatattaaagtcgatagatcagaaagcatac
gaagcaacactcaatcaatttagaaacaaacaaatgtattatgaagatatagcgccattg
ctatatttatcagttaagataaagggattgcacagagaaagtatgatgcagcacatcatt
attgatgaggtgcaggattattcagtcgtccaattagctgcaattagtgcggtctatccc
aatgcacgaaagacgatgctcggcgatagtaatcaaattgtacatcctgcagtgacattt
gaattaccagatgacatcaatgtcattcatttaacaaaatcttatcgctctacagttcaa
attactgaatttacgaaaggtttgataggtaacaatgatacagagtctttaggtgttcaa
ggcgaagatgtattagaactagattacgaagcgtttgttaatactgtagaagcattgcaa
tctgaaagtgtcgccattatcgcacgtgacgttcgacatgctaataagatagcccagact
ttaaagggatgtactttattaacgcacgatcaatatacattcactaaaggaaaagttatc
atgccgaattatatggccaaagggtttgaattctcgcatgtatttattgtcgggtttaat
cagtatgatcgggagcaagatcagttacttttatatacaatcgccagtagagcgacacgt
catctttatttggtaggtgatatcaatgattag
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