KEGG   Marinobacter adhaerens: HP15_3457Help
Entry
HP15_3457         CDS       T01922                                 

Definition
(GenBank) ATP dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mad  Marinobacter adhaerens
Pathway
mad03030  DNA replication
mad03410  Base excision repair
mad03420  Nucleotide excision repair
mad03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mad00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HP15_3457
   03410 Base excision repair
    HP15_3457
   03420 Nucleotide excision repair
    HP15_3457
   03430 Mismatch repair
    HP15_3457
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mad03032]
    HP15_3457
   03400 DNA repair and recombination proteins [BR:mad03400]
    HP15_3457
Enzymes [BR:mad01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     HP15_3457
    6.5.1.6  DNA ligase (ATP or NAD+)
     HP15_3457
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     HP15_3457
DNA replication proteins [BR:mad03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    HP15_3457
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     HP15_3457
DNA repair and recombination proteins [BR:mad03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     HP15_3457
   NER (nucleotide excision repair)
    Other NER factors
     HP15_3457
   MMR (mismatch exicision repair)
    Other MMR factors
     HP15_3457
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_OB_2 DNA_ligase_A_M RNA_ligase
Motif
Other DBs
NCBI-ProteinID: ADP99221
UniProt: E4PFF0
LinkDB All DBs
Position
complement(3637845..3638699)
Genome map
AA seq 284 aa AA seqDB search
MPFRLFSAALPVLISLLFSSVAVAKQPELTLANVYQKGMPLDGYWVSEKLDGVRAYWTGE
RFLSRGGHEYRAPGWFTRGFPARPLDGELWMGRGRFAELSGAVRQVVPDDNDWRRIRFMV
FDLPDKEATFDQRLARLRVLIQEVESPYMALVDQQRASTHEKLMQRLDKMVDGGAEGLML
KLGASHYRSGRSDDLLKVKQYQDAEAVVVHHLPGKGKYEGLMGSLLVELDDGRRFRIGTG
FSDSERASPPRPGTTITFKHYGLTATGLPRFASFLRIRNDEPAR
NT seq 855 nt NT seq  +upstreamnt  +downstreamnt
atgccgtttcgattgttcagcgccgcgctgccggtgctgatttcccttctgttttcctcc
gtggcggtagcgaaacagcccgagctgacactcgccaacgtgtatcaaaagggcatgccg
ctggacggctactgggtcagtgaaaagctcgacggggtgcgagcatactggactggcgag
cgatttctttcccgtggcggtcatgagtatcgggcacccggttggttcaccagagggttt
ccggcacgtcccctggacggtgagctctggatggggcggggccgttttgcggaattgtca
ggggcggtgcgtcaggtggtgcccgatgacaacgattggcggcggattcggttcatggtg
tttgatcttccggataaggaggcaaccttcgaccaacgtttggcccggctgcgtgtatta
atccaagaggttgaatcgccctacatggcgcttgtcgatcagcaacgggcgagcacccat
gagaaactgatgcagcgtctggataagatggtcgacggcggcgcagagggtttgatgttg
aagctgggggccagtcattaccgcagtgggcgctccgatgatctactgaaagtaaaacag
tatcaggatgccgaagcggtggttgttcatcatctgccgggaaagggcaaatacgagggg
ctgatggggtcactgctggtggagttggacgatggcaggcgattccggattggtacgggg
ttcagcgattccgagcgagcgtctcctccgagacccggaaccacgatcacattcaagcac
tatggcctcacagccacggggctgcctcgctttgccagctttctccgtatccggaatgat
gaacctgcgcggtaa

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