Magnetospira sp. QH-2: MGMAQ_0243
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Entry
MGMAQ_0243 CDS
T03795
Symbol
nth
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase (Endonuclease III)
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
magq
Magnetospira sp. QH-2
Pathway
magq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
magq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MGMAQ_0243 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
magq03400
]
MGMAQ_0243 (nth)
Enzymes [BR:
magq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MGMAQ_0243 (nth)
DNA repair and recombination proteins [BR:
magq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MGMAQ_0243 (nth)
Prokaryotic type
MGMAQ_0243 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
CCQ72229
UniProt:
W6K5V6
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All DBs
Position
complement(235327..235962)
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AA seq
211 aa
AA seq
DB search
MKAADVEEFYRRLAAERPEPKGELDYVNPYTLLVAVVLSAQATDKGVNKATGPLFAIADT
PAKMVALGEETVRDYIKTIGLFNTKAKNVIGLSQRLLEEHDGQVPNDRAILESLPGVGRK
TASVVVNIAFGEPTIAVDTHIFRVSNRTGLAPGKTPLAVEKTLEKVTPDHWKRHAHHWLI
LHGRYICKARKPDCPACGVADLCPFKEKTPG
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcggccgacgtcgaagagttctaccgccgcctggccgctgagcgaccggagcca
aagggcgaactggactatgtgaatccctataccttgctggtcgccgtggtgttatcggcc
caggccacggacaagggagtcaacaaggccaccggaccgttgttcgccattgccgatacc
ccggccaagatggtcgccctgggcgaggaaacggtgcgcgactacatcaagaccatcggt
ctgttcaataccaaggccaagaatgtcatcggtctgtcgcaacggctgttggaggaacac
gacggccaggtgcccaatgatcgggcgatcctggaaagcctgcccggcgtcggacgcaag
accgccagcgtggtggtcaatattgcctttggggaaccgaccatcgccgtggatacccat
atcttccgggtttccaatcgcaccggactggccccgggcaagacccccttggcggtggaa
aagacgctggaaaaagtcacgccggatcattggaagcgccatgcgcaccattggctgatc
ctgcacgggcgctatatctgcaaggctcgcaagcccgattgtccggcctgtggcgtggcg
gacctgtgcccgttcaaggagaagacgcccggctga
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