Magnetospira sp. QH-2: MGMAQ_2097
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Entry
MGMAQ_2097 CDS
T03795
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
magq
Magnetospira sp. QH-2
Pathway
magq03030
DNA replication
magq03430
Mismatch repair
magq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
magq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MGMAQ_2097 (dnaE)
03430 Mismatch repair
MGMAQ_2097 (dnaE)
03440 Homologous recombination
MGMAQ_2097 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
magq03032
]
MGMAQ_2097 (dnaE)
03400 DNA repair and recombination proteins [BR:
magq03400
]
MGMAQ_2097 (dnaE)
Enzymes [BR:
magq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MGMAQ_2097 (dnaE)
DNA replication proteins [BR:
magq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MGMAQ_2097 (dnaE)
DNA repair and recombination proteins [BR:
magq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MGMAQ_2097 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
T2SSK
Motif
Other DBs
NCBI-ProteinID:
CCQ73989
UniProt:
W6KAJ7
LinkDB
All DBs
Position
complement(2128430..2131903)
Genome browser
AA seq
1157 aa
AA seq
DB search
MTSSNSYAEFVHLRVHTAYSLSEGAIKVKDLPKLCTNERMPALAITDTNNLFGAMEFSGA
MAGAGVQPIIGCQLGVTRFDKAPSKGSLAPPPDSLVLLCQNEVGYHNLLKLVSKAFLETE
PGDDPQIPLSALADLGEGLICLTGGLAGPVGRLLAEGQDDKAKECLLLLNKSFPGRLYVE
LQRHGLDGEKRIEGPLVDLAYALELPLVATNEAFFADADMFEAHDALLCVAGSTYVSQTE
RRRLTPEHRFKTAAEMRALFADLPEAIDNTLIIAQRCAVMVEKIDPILPPYDCGEGRGEA
DELREQAAAGLEKRLWAGVFPDGMSDDEREQVAKPYRERLDYELDVIAQMGFPGYFLIVS
DFIKWAKTHDIPVGPGRGSGAGSVVAWALTITDLDPLRFGLLFERFLNPERVSMPDFDID
FCQDRRDEVIKYVQDKYGYDHVAQIITFGKLQARAVLRDVGRVLEMPYGQVDRITKLVPN
PPGKPVPLAQAIEDEPQLREMIEDDETVRSLTEKALKLEGLYRHASTHAAGVVIGDRPLD
ELVPLYRDPRSDMPVTQFNMKFVESAGLVKFDFLGLKTLTVLSTAVKLIADKGVTVDLST
ITLEDRPTFEMLGRAESQGVFQLESAGMRDVLKNMKPDTLEDIIAVVALYRPGPMDNIPS
YIRRKHGAEEPDYLYPTLEGILKETYGIIIYQEQVMQIAQELAGYSLGGADLLRRAMGKK
IAEEMEKQRKIFVDGAVAKGVPERKASEIFDLVAKFASYGFNKSHAAAYALVAYHTAYLK
ANHPTEFMAASMTLDINNTDKLNAFRQELTRLKIEVRQPDVNKSEVTFSVERDGEGNSAV
RYALAAIKNVGAEAVRTIVEERRANGPFKDLFDFFDRLDTKAINKRQLENMVRAGALDSL
ERNRHKLFESLETLIAHANVATAERNSNQMGMFGDSGMESAKPKLANVSEWMPMDKLKEE
FDAIGFYLSAHPLDAYGQALKRLDVVASAELLETGRSGAVKLAGTVVAKKERTSARGNRF
AFVSLSDASGAYEVTLFSEQLAQARDLLEAGNSLFIRAAAEFDDDRLRLTANSVESLEVV
AGKTDTGLRLRVMGTDVLEPLGSLLAEQKKGRGEIRLTARLEDATEVEMTLKDRYSVSPT
LVQALQFMEGVAEVREV
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgacctcctccaattcatacgccgagtttgtccatctgcgtgtccatacggcctattcg
ctttccgaaggagcgatcaaggtcaaggacctgcccaagctctgcaccaacgaacgcatg
ccggcgctggccattaccgataccaacaacctgtttggagccatggagttttccggcgcc
atggccggggcgggggtgcagccgatcatcggctgtcagttgggggtcacgcgttttgac
aaggcgccaagcaaaggctctttggccccgccgccggattccctggtgctgctgtgccag
aacgaagtcggctaccacaatcttttgaagttggtcagcaaggcgttcctggagaccgaa
ccaggcgacgacccacagatcccattgagcgccctggcggacttgggcgaggggctgatc
tgcctgaccggcggcttggccggaccggtcgggcggctgttggccgagggccaggatgac
aaagctaaggaatgtcttttgttattaaacaaatcattccccggaagactttatgtagaa
cttcagcgacatggcctggatggcgagaagcggatcgaggggcctcttgtggatctggcc
tatgcccttgagctgccgttggtggccaccaacgaggcttttttcgccgatgctgacatg
ttcgaggcccatgatgcactgctctgtgtcgccgggagcacctatgtttcgcagaccgag
cgccgccgcctgacccccgagcaccgcttcaagaccgccgccgagatgcgggccctgttt
gccgacctgcccgaggccatcgacaacaccctaatcattgcgcagcgctgtgcggtgatg
gtggagaagatcgatcccatcctgccgccgtacgactgtggcgagggccgtggcgaggcc
gatgaattgcgcgagcaggccgctgccgggttggaaaaacggctttgggccggggtcttc
cccgacggcatgtccgacgatgaacgggaacaggtcgccaagccctatcgcgagcgcctg
gactacgagctcgatgtcatcgcccagatgggctttccgggctattttcttatcgtgtcg
gacttcatcaaatgggcgaagacccatgatattcctgtcggaccggggcgcggttccggt
gccgggtcggtggttgcctgggccttgaccattaccgacctggaccccttgcgttttggg
ctgctgtttgagcggttcctcaatcccgagcgtgtgtccatgcccgacttcgacatcgat
ttctgccaggaccggcgagacgaggtgatcaaatacgtgcaggacaaatatggctacgac
catgtggcccagatcattaccttcggaaagttacaggcccgggccgtgctgcgcgacgtg
gggcgggtgctggaaatgccctatggccaggtggaccgtatcaccaagctggtgcccaat
ccgccgggcaagccggtgcccctggcccaggccatcgaggacgaaccgcaactgcgcgag
atgatcgaggacgacgagaccgttcgcagcctgaccgaaaaggccttgaaactggaaggt
ctgtaccgccatgcctcgacccatgcggcgggtgtggtgatcggtgatcggcctttggat
gaactggtgccgctctaccgcgatccgcgttcggacatgccggtcactcagttcaatatg
aaatttgtcgagagcgccgggctggtgaagttcgactttctcgggctcaagaccctcacc
gttctgtccacggcggtcaaactgatcgccgacaagggggtgacggtggatctgtcgacc
atcaccttggaagatcgtccgaccttcgagatgctgggccgggccgagagtcagggcgta
ttccagttggaaagcgccggtatgcgcgacgtgctgaagaatatgaagcccgataccctg
gaagacatcatcgccgtggtggccctgtatcggccgggtcccatggacaacatccccagc
tatatccggcgcaagcatggggcggaggagccggactacctctatccgaccctggaaggc
attctcaaggaaacctatggcatcatcatctatcaggaacaggtgatgcagattgcccag
gagctggcgggctacagcctcggcggcgccgacctgttgcggcgggccatgggcaagaag
attgccgaggaaatggagaagcagcgcaagatcttcgtcgatggcgcggtggccaagggg
gtgccggagcgcaaggcctcggagatctttgatctggtggccaagttcgcctcctacggc
ttcaacaaatcccatgccgccgcctatgccctggtggcttatcacaccgcctatctgaag
gccaatcacccgaccgagttcatggccgcgtccatgaccctcgatatcaacaacaccgac
aagctcaacgccttccgtcaggaactgacacggttgaagatcgaggtgcggcagccggac
gtgaacaaatccgaggtgaccttctcggtggagcgggacggggagggcaacagcgccgtg
cgctacgccctggcggcgatcaagaatgtcggcgccgaggccgtgcggaccattgtcgag
gaacgtcgtgccaacgggccgttcaaggacctgttcgatttcttcgatcgcctggatacc
aaggcgatcaacaaacggcagcttgaaaacatggtgcgggccggcgccctggacagcctg
gaacgcaatcgccacaagctgttcgagagcctggaaaccctcatcgcccatgccaatgtc
gccaccgccgagcgcaacagcaaccaaatgggcatgttcggcgattccggcatggaaagc
gccaagccgaagctggccaatgtgtcggaatggatgcccatggacaagctgaaggaggag
ttcgacgccatcggcttctacctctcggcccatccgctggacgcctatggtcaggcccta
aagcggctggatgtggtggcaagcgccgaactgctggaaaccggacgctccggcgcggtg
aagctggccgggacggtggtcgccaagaaggagcgcacctcggcccggggcaaccgcttc
gcctttgtttccttgtccgatgcttcgggggcctatgaggtcaccttgttctccgagcaa
ttggcgcaggcgcgcgacctgttggaggcgggcaattccctgttcattcgtgcggcggcg
gaattcgacgatgatcgcctgcggctgaccgccaactcggtggaatccctggaagtggtg
gccgggaaaaccgatacgggcctgcgcctgcgggtcatggggacagatgttctagaacct
cttggttccttgctggccgagcagaagaagggtcggggcgagatccgactgaccgcccgc
ctggaggacgccacggaagtggagatgaccctgaaggaccgctattcggtctcgccgacc
cttgttcaggcgttgcagttcatggaaggcgtcgccgaggtgagggaagtttag
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