Magnetospirillum sp. XM-1: XM1_4126
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Entry
XM1_4126 CDS
T04231
Symbol
ruvB
Name
(GenBank) ATP-dependent DNA helicase, component of RuvABC resolvasome
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
magx
Magnetospirillum sp. XM-1
Pathway
magx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
magx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
XM1_4126 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
magx03400
]
XM1_4126 (ruvB)
Enzymes [BR:
magx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
XM1_4126 (ruvB)
DNA repair and recombination proteins [BR:
magx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
XM1_4126 (ruvB)
RecFOR pathway proteins
XM1_4126 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_3
TIP49
AAA_16
AAA_22
nSTAND3
AAA_33
AAA_2
NB-ARC
TsaE
AAA_14
AAA_18
RNA_helicase
AAA_17
Rad17
NTPase_1
NACHT
bpMoxR
AAA_28
Cytidylate_kin
Motif
Other DBs
NCBI-ProteinID:
CUW41185
UniProt:
A0A0U5N8Y6
LinkDB
All DBs
Position
I:complement(4110400..4111443)
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AA seq
347 aa
AA seq
DB search
MTPRMVSPEQNLADAETSLRPLSLDDFVGQRQVCENLKVFIHAARGRGDALDHVLFHGPP
GLGKTTLAQIVARELGVGFRATSGPVIQRAGDLAALLTNLEPNDVLFIDEIHRLNPAIEE
VLYPAMEDFQLDLIIGEGPAARSVRIDLPRFTLVGATTRSGLLTTPLRERFGIPCRMNFY
EPAELESIVSRGARVLGFDLTADGSAEVARRSRGTPRVAGRLLRRVRDFAAVAGKSPVDA
AIADAALNRLEVDRIGLDAMDRRYLRCIAENYGGGPVGVETLAAALSESRDTLEEVVEPY
LLQQGMIQRTPRGRMLSASGFKHIGINPPKDLLVQLDLLTRMDEEGE
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgcgcatggtctcgcccgagcagaacctcgccgatgccgagacctcgctccgg
ccgctgtcgctcgacgattttgtcggccagcggcaggtgtgcgagaacctgaaggtgttc
atccatgccgcccgcggccgtggcgacgcgctcgaccacgtgctgttccacggcccgccc
ggcctgggcaagaccacgctggcccagatcgtggcgcgtgaactgggggtgggctttcgc
gccacctccggtccggtgatccagcgggctggcgacctggcggcgctgctgaccaatctg
gaacccaacgacgtcctgttcatcgacgagatccatcgccttaatcctgccatagaggag
gttctctatcctgcgatggaggactttcagttggatctgatcatcggtgaagggccggcg
gcccgctctgtccgcatcgatctgccccgcttcaccctggtgggggcgaccacccgctcg
ggcctgttgaccacgccgctgcgcgagcgtttcggcattccgtgccgcatgaatttctac
gagccggctgaactggaatccatcgtgtcgcgcggcgcccgcgtgctgggcttcgatttg
accgccgacggctcggccgaggtggcgcgccggtccaggggcacgccccgcgtggcggga
cggctgttgcgccgggtgcgcgatttcgccgccgtggccggcaagtcgccggtggacgcc
gccatcgccgacgcggcgctgaaccgtctggaagtggaccgcatcggcctggacgccatg
gaccgccgctatctccgctgcatcgccgagaattacggcggcgggccggtgggtgtggaa
accctggccgcggcgctctcggaaagccgcgataccctggaagaggtggtcgaaccctat
ctgctgcagcagggcatgatccagcgcacgcccaggggccgcatgctgtcggcttcgggc
ttcaagcatatcggcatcaatccgcccaaggacctcttggtgcagctggatcttctgacc
cgcatggatgaggagggggaatga
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