Mycolicibacterium aichiense: MAIC_39260
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Entry
MAIC_39260 CDS
T06903
Symbol
alkA
Name
(GenBank) putative bifunctional transcriptional activator/DNA repair enzyme AlkA
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
maic
Mycolicibacterium aichiense
Pathway
maic03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
maic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MAIC_39260 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
maic03000
]
MAIC_39260 (alkA)
03400 DNA repair and recombination proteins [BR:
maic03400
]
MAIC_39260 (alkA)
Enzymes [BR:
maic01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
MAIC_39260 (alkA)
Transcription factors [BR:
maic03000
]
Prokaryotic type
Helix-turn-helix
AraC family
MAIC_39260 (alkA)
DNA repair and recombination proteins [BR:
maic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MAIC_39260 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
DUF6233
HHH
Methyltransf_11
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
BBX09123
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All DBs
Position
4029231..4030721
Genome browser
AA seq
496 aa
AA seq
DB search
MHDDFDRCYRAVQSKDSRFDGWFVTAVKTTGIYCRPSCPVRLPLARNVRFYPSSAAAQRA
GFRACKRCRPDASPGSPEWNVRGDAVARAMRLIGDGAVDREGVTGLASRVGYTARQLERM
LQAEVGAGPLALARAQRVQTARVLIETTDMAFSDIAFAAGFASIRQFNDTLRAACDTTPT
ALRAKASRRDWSASAPDGQALSLRLPVRTPFAYEGVFGHLAGTAVPGCEEVRDGAFRRTL
RLPSGYGVVSLTPQPDHVRCTLVLEHVRDLSTAIARCRRLLDLDADPEAVLDVLGADADL
SPVVSKAPGQRIPRTVDEEELTVRAVLGQQVSTKAARTHAGRLVAAYGTPVADPHGGLTH
TFPSTAQLADIDPAHLAVPATRRRTVTTLIEALAGGELTLNPGCDWQQARQQLLALPGIG
PWTAEIVAMRGLGDPDAFPAGDLGVRLAAEQLGLPGDVRELTTHSARWRPWRSYAVQHLW
TTLDHSVNHWPPKETP
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
gtgcatgacgatttcgaccgctgctaccgcgcagtccagtccaaggactcgcggttcgac
ggctggttcgtcaccgcggtcaagaccaccggcatctactgccggccgagctgcccggtg
cggctgccactggcccgcaacgtgcgcttctaccccagttccgcggccgcccagcgagcg
ggcttccgggcctgtaaacggtgccgaccggatgcctcaccgggttcgccggaatggaat
gtccgcggtgacgcggtggcccgggcgatgcgtttgatcggcgacggcgcagtggaccgc
gaaggcgtcacgggactggccagccgggtcgggtacaccgcccgccagttggagcggatg
ctgcaggccgaggtcggtgccgggccgctggccctggcccgcgcacagcgggtgcagacc
gcacgggtgctcatcgagaccaccgacatggcgttcagcgatatcgcgttcgcagctggc
ttcgcgagcatccgccagttcaacgacaccctgcgggcggcctgcgacaccacaccgaca
gcgttgcgggccaaagcctcccgccgggactggtcggcgagcgcgcccgacgggcaagca
ttgtcactgcggctgccggtacgcaccccgttcgcctacgaaggcgtgttcgggcacctg
gcgggcactgctgtccccggctgtgaagaggttcgcgacggcgccttccgccgtacactt
cgcctcccgtcgggctatggcgtggtgagcctgacaccgcagcccgaccacgtgcgctgc
acgctggtgctcgagcatgtcagagatctgtcgacggcgatcgcccgctgccggcggctg
ttggacctcgacgccgacccggaagccgtactcgatgtgctgggtgccgacgccgacttg
agcccagtggtgagcaaggcgcccgggcagcggatcccgcgaaccgtcgacgaagaagaa
ctgacggtgcgggccgtactcggtcagcaggtctccaccaaggcggcacgcacccacgcc
ggccggctcgtcgccgcttacggcacaccggtggccgatccgcatggcggcctgacgcac
acgtttcccagcaccgctcagctggccgacatcgatccggcgcaccttgcggtgccggcc
acccggcggcgcacggtgaccacgctgatcgaggccctcgccggtggcgagctgacactc
aatcccggctgcgactggcagcaggctcgtcaacagctactggcgctacccggaatcgga
ccgtggacggccgagatcgtcgcgatgcgggggctgggtgatcccgacgcctttccggcc
ggcgatctcggtgtgcgactcgcggccgaacaactcggcctgccgggcgacgtgcgggag
ctgaccacacacagtgcacgctggcgaccatggcggtcatacgccgtgcagcatctgtgg
acgactctggaccattccgtgaatcactggccaccgaaggagacaccgtga
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