KEGG   Marinovum algicola: MALG_00370Help
Entry
MALG_00370        CDS       T03981                                 

Definition
(GenBank) DNA ligase, ATP-dependent family
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
malg  Marinovum algicola
Pathway
malg03030  DNA replication
malg03410  Base excision repair
malg03420  Nucleotide excision repair
malg03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:malg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MALG_00370
   03410 Base excision repair
    MALG_00370
   03420 Nucleotide excision repair
    MALG_00370
   03430 Mismatch repair
    MALG_00370
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:malg03032]
    MALG_00370
   03400 DNA repair and recombination proteins [BR:malg03400]
    MALG_00370
Enzymes [BR:malg01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     MALG_00370
    6.5.1.6  DNA ligase (ATP or NAD+)
     MALG_00370
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     MALG_00370
DNA replication proteins [BR:malg03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    MALG_00370
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     MALG_00370
DNA repair and recombination proteins [BR:malg03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MALG_00370
   NER (nucleotide excision repair)
    Other NER factors
     MALG_00370
   MMR (mismatch exicision repair)
    Other MMR factors
     MALG_00370
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID: AKO95574
UniProt: A0A0H4KT41
LinkDB All DBs
Position
complement(378056..379645)
Genome map
AA seq 529 aa AA seqDB search
MKDFAALFARIDESTKTNVKLAALADYLGRAAPQDRLWTIALFTGRRPKRAVTATRLRQW
AAEVARLPEWLLEDSYHVVGDLAETISLVLPAPREPRDQSLSHWIATVKALATLDEAARK
SAVIAAWDSLATQERFLFNKLLTGGFRMGVSARLMTRALAISTGQDAAVLTHKLMGSWTP
ETTSWEALIEADDPTADLSRPYPFYLAHPMENPADLGAPAGWHAERKWDGIRGQFIRRGG
GHHIWSRGEELMTDRFPELAQLADFLPDGTVMDGEILAFAEGAPLGFNALQKRIGLKKVS
AKALREAPVIFMAYDLLEAEGADLRQEPFDARRARLEAVLAEVPPDAPLRLSREVAFDSW
AALAAVRHESRSHNVEGLMIKRRASPYLAGRRRGDWWKWKVDPLTVDAVMIYAQSGSGRR
ANLFTDFTFAVWHGDDLVPFAKAYSGLTDAEFREITAWVRRNTLQRFGPVRQVTPTHVIE
IAFEGIQASSRHKSGVALRFPRMLRWRRDKPVAEANTLADLNELLALYG
NT seq 1590 nt NT seq  +upstreamnt  +downstreamnt
atgaaggatttcgccgccctcttcgcccgcatcgacgaaagcaccaagaccaatgtcaaa
ctcgcggcgctggccgattacctgggccgcgccgcgccacaggatcggctctggaccatc
gcgctctttaccggccgccggccgaaacgcgccgtcaccgcaacccggctgcgccaatgg
gcggccgaggtggcgaggttgcccgaatggctcttggaagacagctatcacgtggtcggc
gatctggccgagaccatcagcctcgtcctgcccgcgccccgcgaaccgcgcgaccagagc
ctcagccactggatcgccacggtcaaggcgctggcgacgctcgacgaggcggcgcgcaaa
tccgccgtcatcgccgcctgggacagcctcgccacgcaagagcggttcttgttcaacaag
ctgctgaccggcggctttcgcatgggtgtcagcgcccggctgatgacccgcgcgctggcc
atctccaccggtcaggacgcggcggtgctgacccacaagctgatgggcagctggacgccg
gaaaccaccagctgggaagcgctgatcgaggccgatgacccgacagccgatctttcgcgc
ccctatccgttctacctcgcccatccgatggaaaacccggccgatctgggcgccccggcc
gggtggcacgccgaacgcaaatgggatggcatccggggccagttcatccggcgcggcggc
gggcatcatatctggtcgcggggcgaagaactgatgaccgaccgcttcccggagctggcg
cagctcgccgatttcctgcccgacggcacggtgatggacggcgagatcctggcctttgcc
gaaggtgcgccactggggttcaacgccttgcagaaacgcatcgggctgaagaaggtctcg
gccaaggcgctgcgcgaggcaccggtgatcttcatggcctacgatctgctcgaagccgag
ggggcggatctgcgacaggagccgttcgacgcgcgccgggcccggctcgaagctgttctg
gccgaagtgcctcccgacgcgcccctgcggctgtcgcgggaagtcgcctttgacagttgg
gcggcgctggcagcggtccggcacgagagccgcagccacaatgtcgagggcctgatgatc
aagcgccgcgccagcccctatctggccggccgcaggcgcggcgactggtggaaatggaag
gtcgatccgctgaccgtcgacgcggtgatgatctatgcgcaatcgggcagcggccggcgc
gccaacctgttcaccgatttcaccttcgcggtctggcacggcgacgatctggtgcccttc
gccaaggcctattccggcctcaccgatgccgagttccgcgagatcaccgcctgggtgcgg
cgcaacacattacagcggttcggcccggtccggcaggtcacgccgacccatgtcatcgag
attgccttcgaggggatacaggcctcgtcgcgccacaaatccggcgtcgcactgcgcttt
ccgcgcatgctgcgctggcgcagggacaagccggtcgcggaggccaacaccctggcagac
ctcaacgaattgctggcgctttacggctga

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