Marinovum algicola: MALG_03512
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Entry
MALG_03512 CDS
T03981
Name
(GenBank) double-strand break repair helicase AddA, alphaproteobacterial type
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
malg
Marinovum algicola
Brite
KEGG Orthology (KO) [BR:
malg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
malg03400
]
MALG_03512
Enzymes [BR:
malg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MALG_03512
DNA repair and recombination proteins [BR:
malg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
MALG_03512
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AKO98655
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All DBs
Position
3597912..3601259
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AA seq
1115 aa
AA seq
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MTQRDEATQRQIEAAHPDRSTWLAANAGSGKTRVLTDRVARLLLQGVLPEHILCLTYTKA
AASEMQNRLFQRLGDWAMKDDAAMHHALHDLGIEGHISEDALRRARTLFARAIETPGGLK
IQTIHSFCAAILRRFPLEAGVSPQFKEMEDRAAALLQAEIVDEMADGAAAGTVEALAAHL
TGADFAEITTEVVRHRQLLFRRLPRTELHALFGLPETAGEDWLLDQVFLGGELEMLHQVA
DVLAGSGANDQKAAAKLRTITAPDLSALAVLEGVLLNGASAKAGPYSAKIGGFPTKGPRE
GALAGVMDRLEDLMRRVEAARDARCALAAVGKTQALQAFAAEFLPRYEAAKLARGWLDFD
DLIHKTLALLTDRKVAQWVLYRLDGGIDHILVDEAQDTSPVQWRVIEELAREFTSGEGAR
AETPRTIFVVGDKKQSIYSFQGADPAEFDRMKAEFATRLRAADQPLQDTTLQFSFRSAEA
ILRLVDTLFEARARSGFSREETHRAFKSDMGGRVDLWPLVKKSSDAEQGDWDDPVDLPAD
THHNVTLARRIAGEIKRMLAENTPIPWKKEPHGWAGRTVTPGDFLILVQRRSDLFAEIIR
ACKEEGLPIAGADRLKVGAELAVRDLAALLNWLALPEDDLSLATVLKSPLGGWDEGQLYE
LAQGREQKYLWRELAARQADFPELWAMLTDLQNAADFMRPYDLIERILTRHDGRQKLLAR
LGTEAEDGINALLSQALAYEKTEIPSLTGFLIWMETDDLEIKRQMDAAGDRIRVMTVHGS
KGLEAPIVILPDTAKRTVQLRDALLPMGETAVWKSAATDCPRAMSDALEAAKERQRQERD
RLLYVAMTRAETWLIVAAAGDLGKDGESWYAGVETAMSAANAAPQTFAFGAGLRYESGDW
PRVAAVPEPPEDPAAVVLPAWATCPAAAPPAPAETRAPSDLGGAHALAGMLGQDEEAAKR
HGTLVHLALERLSDLPEAARDRRPGDALRALAHDEACAVLANPGLAALFAPGTLAEVAVS
ADVPGLGRMHGVIDRLILDETRVLAVDFKTNATVPDRPDATPEALLRQMGAYAEMLKHLY
PKHEIETAILWTRSAALMTLPHDLVTAALARTTSP
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgacccaacgcgacgaggccacccagcgccagatcgaggcggcgcaccccgaccgttcc
acctggctggccgccaatgccggctcgggcaagacccgggtgctcaccgaccgggtggcg
cggctgttgttgcagggcgtgctgcccgaacacatcctctgcctgacctacaccaaggcc
gccgccagcgagatgcagaaccggctgttccagcgcctgggtgactgggcgatgaaggac
gacgcggcgatgcatcacgcgctgcacgatctggggatcgaggggcatatttccgaggat
gcgctgcgccgcgcccgcacgctgtttgcccgcgccatcgaaacgccgggcggactcaag
atccagaccatccactcgttctgcgccgccatcctgcgacggtttccgctcgaggccggg
gtttcgccgcaattcaaggagatggaggaccgcgccgccgcgctgctccaggccgagatc
gtcgacgagatggccgacggcgcggccgccggaacggtcgaggcgctggccgcgcatctc
accggcgccgatttcgccgagatcaccaccgaggtggtgcgccaccggcaattgctgttc
cggcgcctgccgcggaccgagttgcatgcgcttttcggcctgccggagacggctggcgag
gactggctgctcgatcaggtctttctgggcggcgagctcgagatgctgcatcaggtcgcg
gatgttctggccggcagcggcgccaacgatcagaaggcggcggcgaaactgcggacgatc
accgcgcccgacctgagcgcgctggcggtgctggaaggcgtgctactcaatggtgccagc
gccaaggccgggccctacagcgccaagatcggcggctttcccaccaaggggccgcgcgag
ggcgcgctggccggcgtcatggaccggctcgaagacctgatgcgccgggtcgaggcggcg
cgcgatgcccgctgcgccctggcggcggtcggaaaaacccaggccctgcaagcctttgcc
gccgaattcctgccgcgctacgaggccgccaagctggcccgcggctggctcgacttcgac
gacctgatccacaagacgctggcgcttctgaccgatcggaaggtggcgcaatgggtgctc
taccggcttgatggcggcatcgatcacatcctcgtcgacgaggctcaggacaccagcccg
gtgcaatggcgggtgatcgaagagctggcacgcgagttcaccagcggcgaaggcgcccgg
gccgagacgccgcgcacgatctttgtggtcggcgacaagaagcaatcgatctattccttc
cagggcgccgatccggccgagttcgaccggatgaaggccgaattcgccacccgcctgcgc
gccgccgatcaaccgttgcaggacaccacgctgcaattttccttccgctcggccgaggcg
atcctgcggctggtcgataccctgttcgaagcccgcgcccgctcgggcttttcgcgcgag
gaaacccaccgcgcgttcaaatccgacatgggcgggcgggtcgatctctggccgctggtc
aaaaaatccagcgatgccgaacagggcgactgggacgatcccgtcgacctgcccgccgac
acccaccacaatgtcaccctcgcccgaaggattgccggcgagatcaagcggatgcttgcc
gaaaacaccccgatcccgtggaaaaaggagccgcatggctgggccgggcgcaccgtgacc
ccgggcgatttcctgatcctggttcagcgccgctcggatctctttgccgagatcatccgc
gcctgcaaggaagaggggctgccgattgccggggccgaccggctcaaggtcggggccgag
ctggccgtgcgcgatctggcggcgctcctgaactggctggcactgccggaggacgatctg
agcctcgccacggtgctgaaatcgccgttgggcggctgggacgaagggcagctttacgag
ctggcccagggccgcgaacagaaatacctctggcgcgagctggcggcgcggcaggcggac
ttccccgaactctgggcaatgctcaccgatcttcagaacgccgccgatttcatgcggccg
tatgatctgatcgagcgcatcctgacgcggcatgacggccggcagaagctgctggcgcgg
ctcggcaccgaggccgaggatggcatcaacgccctgctcagccaggcgttggcctacgag
aagaccgagatccctagcctcaccggcttcctgatctggatggaaaccgacgatctcgag
atcaagcgccagatggacgccgccggcgaccgcatccgggtgatgacggtgcatggctcc
aaggggctggaagcgccaatcgtgatcctgccggacaccgccaagcggaccgtgcagctg
cgcgacgccctgctgccgatgggcgaaacggcggtgtggaaaagcgccgccaccgactgc
ccccgcgccatgtcggacgcgctggaagcggccaaggaacggcaaaggcaggaacgcgac
cggctgttgtatgtggcgatgacccgggcggaaacctggctgatcgtggcggcggcgggc
gatctcggcaaggatggcgagagctggtacgccggcgtcgaaacggcgatgagcgccgcc
aatgccgcaccgcagaccttcgcctttggcgcagggctgcggtatgaaagcggcgactgg
ccgcgggtcgccgcagtgcccgagccgccggaagacccggccgccgttgtcctgccggcc
tgggccacctgcccggccgcggcgccgcctgcgccagcagaaacccgcgcgccctccgat
ctcggcggcgcccatgcgctggcgggcatgctgggccaggacgaagaggcggcaaagcgc
cacggcacgctggtgcatctggcgctcgaacggctgtccgatctgcccgaggccgcccgc
gaccggcggcccggggacgcgctgcgcgccctggcgcatgacgaggcctgcgcggttctg
gcgaaccccggtctggccgcgctctttgcccccggcaccctggccgaggtggcggtgagc
gccgatgtgcccgggctcggccggatgcatggggtgatcgatcggctgatcctggacgag
acccgcgttctggcggtggatttcaagaccaacgccaccgtgcccgaccgccccgacgcc
acgccggaggcgctgctgcggcagatgggcgcttatgccgaaatgcttaagcatctctat
ccaaagcacgaaatcgaaaccgccattctctggacccggtcggccgcgctgatgaccctg
ccacacgatcttgtgacggccgcgctggcgcgcactacatcgccttga
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