KEGG   Mesorhizobium australicum: Mesau_00823Help
Entry
Mesau_00823       CDS       T02417                                 

Definition
(GenBank) DNA ligase D
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
mam  Mesorhizobium australicum
Pathway
mam03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:mam00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    Mesau_00823
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mam03400]
    Mesau_00823
Enzymes [BR:mam01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Mesau_00823
DNA repair and recombination proteins [BR:mam03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     Mesau_00823
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: LigD_N DNA_ligase_A_C DNA_ligase_A_M DNA_primase_S RNA_ligase mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID: AGB43307
UniProt: L0KDE8
LinkDB All DBs
Position
complement(865510..868050)
Genome map
AA seq 846 aa AA seqDB search
MASSLEQYHSKRDFKKTAEPAGKVARGKKAGGIFVVQKHAATRLHYDFRLEHDGVLWSWA
VTRGPSLDPHEKRLAVHVEDHPIDYAGFEGTIPKGEYGGGSVLVWDEGTWMPEGDPAKMM
AKGHINFELEGHKLRGKWHLVRLRPRPGEKRDNWLLIKSDDAAARPGEDILQDEPKSVKS
GLTIEEVGEGKAAKGEKPKVWHSNKPAAGKAKTGGKKLDFIEPQLATLERDAPSGQDWLH
EVKFDGYRMQAQIAGTDVRLLTRTGLDWTEKFGGEIAAELAGLKCSDAILDGEIVVLANS
GVSSFALLQQDLSAKRTNRFIYYVFDLMRLDGKDLRREPLVERKQALQALLGEPSDTAAV
RFSDHFAEPGKIMLEHACRMGLEGVVSKRADAPYRSGRGPAWVKSKCTARQEFVIGGYLP
SDKTGRGLRSLLVGYFEGGSLHYAGRVGTGFSTKSANDLKKKLDALKADASPFDAAVPKG
KGLVWVKPELVGEVEFRSWTSDRIIRHASFQGLREDKPAEEVVQEKPNATGTGAAGTKTA
TGKSPAKAKPAAGSAITAATAAKTSVKLSHPDKLLWPDEKISKQALLDHYALVWPRMKQF
VVDRPLSLVRAPDGVGGQRFFQKHASPGMHAKIEKTKDPTDGEEILFIRDFDGIAALVQL
GVVEIHIWGCTIDKLEQPDQVVFDLDPDEGVDVKAVREAALDIRGKLDELSLPNFVKTSG
GKGFHVVVPLKPSADWAEVKGFAHDFARALEQGAPDRYTATLSKKARTGKIFVDYLRNGS
GATTVAPYSSRAKKGATVSMPVTWAEIEAGLPPNAFPIGDKTTLKRLSEADPWVDFFKKG
KVLKRG
NT seq 2541 nt NT seq  +upstreamnt  +downstreamnt
atggccagcagcctcgaacagtatcattcgaagcgcgacttcaagaagaccgccgagccg
gccggcaaggttgcgcgcggcaagaaggccggcggcatcttcgtcgtccagaagcatgcc
gccacaaggctgcattacgattttcgcctcgagcatgacggcgtgctgtggagctgggcg
gtgacgcgcggtccgagcctcgacccgcacgaaaagcggctggccgtgcatgtcgaggat
catcccatcgactatgccggcttcgaaggcaccatccccaagggcgagtatggcggcggc
tcggtcctcgtctgggacgagggcacctggatgcccgagggcgatccggccaagatgatg
gcgaaggggcacatcaacttcgagctcgagggccacaagctgcgtggcaagtggcacctg
gtgcggctgcggccgcggcccggcgaaaaacgcgacaactggctgctgatcaagtcggac
gatgccgccgcacgccccggcgaggatattctgcaagacgagccgaaatcggtgaaatca
ggcctgacgatcgaggaggtcggtgaaggcaaggcggccaagggcgagaagccgaaggtc
tggcattcgaacaagccggccgccggcaaggccaagaccggcggcaagaagctcgatttc
atcgagccgcagctcgccacgctggagcgcgacgcaccgtcgggccaggactggctgcat
gaggtgaagttcgacggctaccgcatgcaggcgcagatcgccggcaccgacgttcggctc
ctgacccgcaccggcctcgattggacggaaaaattcggcggcgagatcgcggccgaactc
gccgggctgaaatgcagcgacgccatcctcgacggcgagatcgtcgtgctggccaacagc
ggggtatcgtccttcgcgctgctgcagcaggatctttcggcgaagcggacgaaccgcttc
atctattacgtcttcgacctgatgcggctcgacggcaaggatttgcgccgcgagccgctt
gtcgagcgcaagcaggccctgcaggcgctgctcggcgagccgtccgacaccgcggcggtg
cgtttttccgaccattttgccgaacccggcaagatcatgctggaacatgcctgccgcatg
gggctggaaggcgtcgtctcaaaacgcgccgatgcgccctaccggagcgggcgcggtccg
gcatgggtcaaatcgaaatgcacggcacggcaggaattcgtcattggcggctatctgccg
tcggacaagaccggacgcggcctgcgctcgctgctggtcggctatttcgaaggcggcagc
ctgcactatgccggccgtgtcggcaccggcttctccaccaagagcgccaacgacctgaag
aagaagctcgatgcgctgaaggcggacgcctcgcccttcgatgcggccgtgccgaagggc
aagggcctggtctgggtcaagccggaactggtcggcgaagtggagtttcgcagctggacg
tcggaccgtattatacgccatgcttcgttccaggggctgcgcgaggacaagccggcggag
gaagtcgtgcaggaaaagcccaatgcaacgggaacaggggcagcgggaaccaaaacagcg
acaggcaaaagccccgccaaggccaagccggcggcaggcagcgccattacggcagcaaca
gcggcgaaaaccagcgtgaagctgtcccacccggacaagcttctgtggcccgacgaaaag
atctcgaagcaggccctgctcgatcactacgcgctggtatggccgcgcatgaagcaattc
gtggtcgaccgcccgctcagccttgtcagggcgcccgatggcgtcggcggccagcgtttc
ttccagaagcatgcctcgcccggcatgcatgcgaagatcgaaaagaccaaggaccccacg
gatggcgaggaaatcctgttcatccgcgatttcgacggcatcgcggcgctggtccagctc
ggcgtggtcgagatccacatctggggctgcaccatcgacaagcttgaacagcccgaccag
gtcgtcttcgacctcgaccccgacgagggcgtcgatgtgaaggcggtgcgcgaggcggcg
ctcgacatcaggggcaagctcgacgagctgtcgctgcccaatttcgtcaagacatcgggc
ggcaagggctttcacgtcgtcgttccgctgaagccgtcggcggattgggccgaggtcaaa
ggcttcgcccatgatttcgccagggcgctggagcaaggcgcgccggaccgttacaccgcg
acgctgtcgaagaaggcgcgcacggggaagatcttcgtcgactacctgcgcaacggcagc
ggcgcgaccaccgtcgcgccctactcctcgcgcgccaagaaaggcgcgacggtgtcgatg
ccggtgacctgggccgagatcgaggccggcctgccaccgaacgccttcccgatcggcgac
aagacgacgctgaaacggctctcggaagccgatccgtgggtggatttcttcaagaagggg
aaggtgctgaagcggggctag

DBGET integrated database retrieval system