Mesorhizobium australicum: Mesau_03805
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Entry
Mesau_03805 CDS
T02417
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mam
Mesorhizobium australicum
Pathway
mam03410
Base excision repair
mam03430
Mismatch repair
mam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Mesau_03805
03430 Mismatch repair
Mesau_03805
03440 Homologous recombination
Mesau_03805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mam03400
]
Mesau_03805
DNA repair and recombination proteins [BR:
mam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Mesau_03805
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Mesau_03805
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Mesau_03805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
RecJ_OB
DHH
Motif
Other DBs
NCBI-ProteinID:
AGB46158
UniProt:
L0KPY2
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All DBs
Position
3863999..3865780
Genome browser
AA seq
593 aa
AA seq
DB search
MMGERRLFLDVRQSATGLSWEHRLTERQDMIALAIAQGHGVPDIVARVLAGRGVAADETE
RFLDPTIRDLLPNPASLTDMDKAAIRIAAAVMAREKIAIFGDYDVDGAASSALLKRFLTH
FSVPSEIYIPDRIFEGYGPNPDAMRELVSRGATLIVTVDCGTNSAVSIDAANAAGADVVV
LDHHQVGGVLPAAIAVVNPNRDDDLSGQGHLCAAGVVFLALVQTAKVLRGLSDVTPPDLL
SLLDLVALATVCDVVPLTGVNRAFVVKGLQVARQQKNEGMAALARVSRVGEPISTFHLAY
LIGPRINAGGRIGDAALGSRLLATDDPVEAQTIAETLDRLNQERQLMEQEMLAAARAEAD
AELAGGSGPAIVVTASNSWHPGIVGLLASRLKDHARRPAFAIAFNANGTGTGSGRSVSGF
DLGRLVREAANAGLIVKGGGHGMAAGITVERARLGELRAFFEERAAADVFRLQDEESLAI
DGALAAEGATLGLLDALEKAGPFGAGHVAPVFVLPRHRLADIRPVGTNHIRADLQSESGG
RIQAIAFRAVDTVLGEFLSKNRGKTVHVAGSLSGNYWNGNRTVQFRIIDAARA
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgatgggcgaaaggcgcctcttcctcgatgtcaggcagtcggcaaccggtctctcctgg
gagcaccggctgaccgaacggcaggacatgatcgcgctcgccatcgcacagggtcatggc
gtgcccgacatcgtcgcgcgcgttcttgccggacgcggcgtggccgccgatgagaccgag
cggtttctggacccgacgatccgcgacctgttgccgaacccggcctcgctgaccgatatg
gacaaggccgctatccgcatcgccgccgccgtcatggcgcgggagaaaattgcgatcttc
ggcgattacgacgtagatggcgcggcctcgtcggccttgctgaagcggtttctcacgcat
ttctcggtgccgtccgaaatctatatcccggatcgtattttcgagggctacggtcccaat
cccgatgccatgcgcgaactggtatcgcgcggcgcgacgctgatcgtcacagtcgattgc
ggcaccaacagcgccgtttcgatcgacgcggccaatgccgccggcgccgatgtcgtggtg
ctcgaccaccaccaggtcggcggcgtcttgcctgcggcaattgccgtcgtcaatccaaac
cgcgacgacgacctttccggacagggccatctctgtgccgccggtgtcgtgttcctcgcc
ttggtacagaccgcaaaggtgctgcgtggcctgagcgatgtcacgccgcccgacctgctt
tccctgctcgatctcgtggcgcttgccaccgtctgcgacgtggtgccgctcacgggcgtc
aatcgcgccttcgtcgtcaagggtttgcaagtggcgcggcagcagaagaatgaaggaatg
gccgcgctggcacgagtgtcgcgcgttggcgagccgatcagcaccttccatctcgcctat
ctgatcggtccgcgcatcaatgcgggcgggcgaattggcgatgcggcactcggtagtcgg
ctgcttgcaacggacgatcccgtcgaggcgcagaccatcgccgagacgctagaccggctg
aaccaggagcggcagctgatggagcaggagatgctcgccgccgcgcgcgccgaagccgat
gccgagctcgcgggcggcagcgggccggcgatcgtcgtcaccgccagcaacagctggcac
cccggcatcgtaggcctgcttgcctcacgactgaaggatcacgcacggcggccggccttt
gctatcgccttcaacgccaacggcaccggcacgggctcgggccgttcggtgtcgggtttc
gaccttggccggctggtgcgcgaagccgccaatgccgggctcatcgtcaagggcggcggc
catggcatggctgccggcatcaccgtcgagcgggcaagactgggtgagctcagggccttc
ttcgaggagcgggcagccgccgacgttttcaggttgcaggatgaggaaagtctggcgata
gacggcgcgcttgccgccgaaggcgcgacgctcggcctgctcgatgcgttggaaaaggcg
gggcccttcggtgccgggcatgtcgcgcctgttttcgtgctgccgcgccatcggctggcc
gacatcaggccggtcggcaccaaccatattcgcgccgatttacagtcggagagcggcggc
cgcatccaggcgatcgcctttcgcgccgtcgatacggtgcttggcgagttcctttccaag
aaccgcggcaagacggtgcatgtcgccggctcgctgtcgggcaattactggaacggcaac
cgtacggtgcagtttcgcatcatcgacgccgcgcgggcgtag
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