Micavibrio aeruginosavorus EPB: A11S_1798
Help
Entry
A11S_1798 CDS
T02517
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
man
Micavibrio aeruginosavorus EPB
Pathway
man03030
DNA replication
man03410
Base excision repair
man03420
Nucleotide excision repair
man03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
man00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A11S_1798
03410 Base excision repair
A11S_1798
03420 Nucleotide excision repair
A11S_1798
03430 Mismatch repair
A11S_1798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
man03032
]
A11S_1798
03400 DNA repair and recombination proteins [BR:
man03400
]
A11S_1798
Enzymes [BR:
man01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
A11S_1798
DNA replication proteins [BR:
man03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
A11S_1798
DNA repair and recombination proteins [BR:
man03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
A11S_1798
NER (nucleotide excision repair)
GGR (global genome repair) factors
A11S_1798
MMR (mismatch excision repair)
DNA ligase
A11S_1798
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
A11S_1798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
zf-NADH-PPase
5_3_exonuc
PG_binding_2
SHOCT
Motif
Other DBs
NCBI-ProteinID:
AGH98600
UniProt:
M4VJD9
LinkDB
All DBs
Position
complement(1828481..1830553)
Genome browser
AA seq
690 aa
AA seq
DB search
MGDSLFNTPPEIVAEYKKLVKELERHDIAYHQKDTPEISDAEYDRMKKRFFDIAVQYPEI
ASKKDLDKVGAPVAAGFKKIRHTVPMLSLGNAFEDQDVSDFIDRVRRFLNFNDAIAVVAE
PKIDGLSCSLRYENGVLVQAATRGDGTEGEDITANVRTIRDVPQDLKGTVPDILEVRGEI
YMRRDEFMALNTRQEEQGKPVFANPRNAAAGSVRQLDSSITASRPLRFFGYALGDISAPI
ADTQWGIRKALVKMGFAEAEPAQLCETTEQILEYYTKVMNLRPDLDYDIDGVVYKVDRLD
LQSRLGFVSRAPRWAIAHKFPAEQAVTIVHGIDIQVGRTGTLTPVARLEPVTVGGVVVSN
ATLHNEDEIARKDVRIGDHVVIQRAGDVIPQVVSVVMDKRAKDAAPYEFPHICPACGSPA
VRPEGEVARRCTGGMICPAQAVERLKHFVSRDAFDIEGLGDKIIREFWDDGLVRAPADIF
TLQDRDRGSLTPIRARMGWGDQSAKKLFDAIEARRTIPLDRFIYALGIRQIGQATAKRLA
AHYGTFDAVYDAMRAAYDPESDAVADLLRVEDVGPSVAEDLIRFFNDQKNHVIVDDLLAQ
LTIEPYVAPQVGDSPVAGKTVVFTGTLVTMTRGEAKARAESLGAKVAGSVSKKTDYVVAG
DDAGSKLAKARELGVNVLTEAEWAALIAGL
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
ttgggcgattctttattcaacaccccgcccgaaattgtcgcggaatataaaaaactggtg
aaggaactggaacggcacgacattgcctatcaccagaaggacacgccggaaatatccgat
gccgaatatgaccggatgaagaagcggttttttgacattgccgtacaatacccggaaatt
gcatccaagaaagatctggacaaggtcggtgccccggtggccgccggatttaaaaaaatc
cgccacacggtcccgatgttatcactgggcaacgcattcgaagaccaggacgttagcgat
ttcattgatcgcgtgcgccgattcctgaatttcaatgatgcaatcgccgtcgtggccgag
ccgaaaattgacgggttgtcctgttccctgcgctatgaaaacggtgttttggtccaggcg
gcgacgcgcggcgatgggaccgagggcgaggacattaccgcaaacgtccgcaccattcgc
gatgtgccgcaggacttaaagggcaccgttcccgatattttggaagtgcgcggtgaaatt
tacatgcgccgtgatgaattcatggcgctgaatacgcggcaggaggaacaaggaaaaccc
gtcttcgccaacccgcgcaatgcggcggcgggcagtgtgcggcaactggattcgtccatt
accgcgtcgcgaccgttgcggttctttggctatgcgctgggcgatatctctgcgccaatt
gccgatacgcaatggggcattcgcaaggcgctggtgaagatgggctttgccgaggccgaa
cccgcgcaattgtgtgaaacaaccgaacagatccttgaatattataccaaggttatgaac
ctacgcccggacctggattacgatattgacggggtggtgtacaaggtagaccgccttgat
ctgcaatcccgccttgggtttgtatcgcgcgcgccgcgctgggccattgcgcataaattc
ccggcggaacaggccgtcaccatcgtgcatggcattgatattcaggtgggccggacggga
acattaacacccgtggcgcgactggagcccgtcaccgttggcggtgtggtcgtatccaac
gcgacattgcacaacgaagacgaaatcgcgcgcaaggatgtgcgtattggcgaccatgtg
gtgatccagcgcgcgggcgatgtgattccgcaagtggtcagcgtggtgatggacaagcgc
gcgaaagacgccgcgccttatgaatttccgcacatctgtccggcctgtggttcacctgcc
gtgcggcctgagggggaagtggcccgccgttgtacgggcggtatgatctgtccggcgcag
gcggtggagcggttgaaacatttcgtgtcccgcgatgcgttcgatatcgaagggctgggc
gataaaatcattcgtgaattctgggatgatggtttggttcgagcgccagccgatattttc
accttgcaggaccgcgatcgcggtagcctgacgcccatccgcgcccgcatggggtggggg
gatcaatcggccaagaaattattcgatgcgattgaagcgcgtcgaaccattccgctggat
cgttttatctatgcccttggcattcgtcagatagggcaggcgacggccaagcgtctggcg
gcacattacggcacgtttgatgcggtgtatgacgcaatgcgtgcggcgtatgatccggag
tctgatgctgtggcggatttgttgcgcgtggaagatgttggacccagcgtagccgaagat
ctcatacgctttttcaacgatcagaaaaatcacgttatcgttgatgatttgctggcccaa
ctcaccatcgaaccctatgtcgcaccgcaggtgggggatagccccgtggccgggaaaacc
gttgtgtttaccggcacgctggtcaccatgacgcggggcgaggccaaggcccgcgcggaa
tcgctgggggccaaggtggccgggtccgtttcaaaaaagacggattatgtcgtagcgggt
gacgatgccgggtcaaaactggccaaggcccgggaattgggcgtgaatgttttgaccgaa
gcggagtgggcggcgctgatcgcggggctgtaa
DBGET
integrated database retrieval system