KEGG   Micavibrio aeruginosavorus EPB: A11S_1798
Entry
A11S_1798         CDS       T02517                                 
Name
(GenBank) DNA ligase
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
man  Micavibrio aeruginosavorus EPB
Pathway
man03030  DNA replication
man03410  Base excision repair
man03420  Nucleotide excision repair
man03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:man00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    A11S_1798
   03410 Base excision repair
    A11S_1798
   03420 Nucleotide excision repair
    A11S_1798
   03430 Mismatch repair
    A11S_1798
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:man03032]
    A11S_1798
   03400 DNA repair and recombination proteins [BR:man03400]
    A11S_1798
Enzymes [BR:man01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     A11S_1798
DNA replication proteins [BR:man03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     A11S_1798
DNA repair and recombination proteins [BR:man03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     A11S_1798
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     A11S_1798
   MMR (mismatch excision repair)
    DNA ligase
     A11S_1798
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      A11S_1798
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD HHH_5 PTCB-BRCT zf-NADH-PPase 5_3_exonuc PG_binding_2 SHOCT
Other DBs
NCBI-ProteinID: AGH98600
UniProt: M4VJD9
LinkDB
Position
complement(1828481..1830553)
AA seq 690 aa
MGDSLFNTPPEIVAEYKKLVKELERHDIAYHQKDTPEISDAEYDRMKKRFFDIAVQYPEI
ASKKDLDKVGAPVAAGFKKIRHTVPMLSLGNAFEDQDVSDFIDRVRRFLNFNDAIAVVAE
PKIDGLSCSLRYENGVLVQAATRGDGTEGEDITANVRTIRDVPQDLKGTVPDILEVRGEI
YMRRDEFMALNTRQEEQGKPVFANPRNAAAGSVRQLDSSITASRPLRFFGYALGDISAPI
ADTQWGIRKALVKMGFAEAEPAQLCETTEQILEYYTKVMNLRPDLDYDIDGVVYKVDRLD
LQSRLGFVSRAPRWAIAHKFPAEQAVTIVHGIDIQVGRTGTLTPVARLEPVTVGGVVVSN
ATLHNEDEIARKDVRIGDHVVIQRAGDVIPQVVSVVMDKRAKDAAPYEFPHICPACGSPA
VRPEGEVARRCTGGMICPAQAVERLKHFVSRDAFDIEGLGDKIIREFWDDGLVRAPADIF
TLQDRDRGSLTPIRARMGWGDQSAKKLFDAIEARRTIPLDRFIYALGIRQIGQATAKRLA
AHYGTFDAVYDAMRAAYDPESDAVADLLRVEDVGPSVAEDLIRFFNDQKNHVIVDDLLAQ
LTIEPYVAPQVGDSPVAGKTVVFTGTLVTMTRGEAKARAESLGAKVAGSVSKKTDYVVAG
DDAGSKLAKARELGVNVLTEAEWAALIAGL
NT seq 2073 nt   +upstreamnt  +downstreamnt
ttgggcgattctttattcaacaccccgcccgaaattgtcgcggaatataaaaaactggtg
aaggaactggaacggcacgacattgcctatcaccagaaggacacgccggaaatatccgat
gccgaatatgaccggatgaagaagcggttttttgacattgccgtacaatacccggaaatt
gcatccaagaaagatctggacaaggtcggtgccccggtggccgccggatttaaaaaaatc
cgccacacggtcccgatgttatcactgggcaacgcattcgaagaccaggacgttagcgat
ttcattgatcgcgtgcgccgattcctgaatttcaatgatgcaatcgccgtcgtggccgag
ccgaaaattgacgggttgtcctgttccctgcgctatgaaaacggtgttttggtccaggcg
gcgacgcgcggcgatgggaccgagggcgaggacattaccgcaaacgtccgcaccattcgc
gatgtgccgcaggacttaaagggcaccgttcccgatattttggaagtgcgcggtgaaatt
tacatgcgccgtgatgaattcatggcgctgaatacgcggcaggaggaacaaggaaaaccc
gtcttcgccaacccgcgcaatgcggcggcgggcagtgtgcggcaactggattcgtccatt
accgcgtcgcgaccgttgcggttctttggctatgcgctgggcgatatctctgcgccaatt
gccgatacgcaatggggcattcgcaaggcgctggtgaagatgggctttgccgaggccgaa
cccgcgcaattgtgtgaaacaaccgaacagatccttgaatattataccaaggttatgaac
ctacgcccggacctggattacgatattgacggggtggtgtacaaggtagaccgccttgat
ctgcaatcccgccttgggtttgtatcgcgcgcgccgcgctgggccattgcgcataaattc
ccggcggaacaggccgtcaccatcgtgcatggcattgatattcaggtgggccggacggga
acattaacacccgtggcgcgactggagcccgtcaccgttggcggtgtggtcgtatccaac
gcgacattgcacaacgaagacgaaatcgcgcgcaaggatgtgcgtattggcgaccatgtg
gtgatccagcgcgcgggcgatgtgattccgcaagtggtcagcgtggtgatggacaagcgc
gcgaaagacgccgcgccttatgaatttccgcacatctgtccggcctgtggttcacctgcc
gtgcggcctgagggggaagtggcccgccgttgtacgggcggtatgatctgtccggcgcag
gcggtggagcggttgaaacatttcgtgtcccgcgatgcgttcgatatcgaagggctgggc
gataaaatcattcgtgaattctgggatgatggtttggttcgagcgccagccgatattttc
accttgcaggaccgcgatcgcggtagcctgacgcccatccgcgcccgcatggggtggggg
gatcaatcggccaagaaattattcgatgcgattgaagcgcgtcgaaccattccgctggat
cgttttatctatgcccttggcattcgtcagatagggcaggcgacggccaagcgtctggcg
gcacattacggcacgtttgatgcggtgtatgacgcaatgcgtgcggcgtatgatccggag
tctgatgctgtggcggatttgttgcgcgtggaagatgttggacccagcgtagccgaagat
ctcatacgctttttcaacgatcagaaaaatcacgttatcgttgatgatttgctggcccaa
ctcaccatcgaaccctatgtcgcaccgcaggtgggggatagccccgtggccgggaaaacc
gttgtgtttaccggcacgctggtcaccatgacgcggggcgaggccaaggcccgcgcggaa
tcgctgggggccaaggtggccgggtccgtttcaaaaaagacggattatgtcgtagcgggt
gacgatgccgggtcaaaactggccaaggcccgggaattgggcgtgaatgttttgaccgaa
gcggagtgggcggcgctgatcgcggggctgtaa

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