Mannheimia pernigra ZY170218: GM695_06655
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Entry
GM695_06655 CDS
T06423
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mann
Mannheimia pernigra ZY170218
Pathway
mann03410
Base excision repair
mann03430
Mismatch repair
mann03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mann00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GM695_06655 (recJ)
03430 Mismatch repair
GM695_06655 (recJ)
03440 Homologous recombination
GM695_06655 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mann03400
]
GM695_06655 (recJ)
DNA repair and recombination proteins [BR:
mann03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
GM695_06655 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GM695_06655 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GM695_06655 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
RecJ_OB
Methyltransf_23
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
QHB17734
UniProt:
A0A857ESU8
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All DBs
Position
1355393..1357114
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AA seq
573 aa
AA seq
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MEKLIKKRPLLTTKTLSENPLLNRIYQSRGIKTTKELEHNFQHLLRPQQLANIEQAVDLL
INAFDKQSRIIIVGDFDADGATSTALAIIALRRLGFEQVEYLIPDRFSQGYGLSVAVAEI
VIAKGADLVLTVDNGISSFEGVELLKQNDIQVLITDHHLPPEALPIADAMINPNLPFCTF
PSKSLAGVGVIFYVMMALRTRMREQKYFHNKVEPNFAELLDLVALGTVADVVPLDQNNRI
LVYQGLQRIRSGHCRLGIKALAEVSKRELLTLQASDLGFVIAPRLNAAGRLENMSLGVEL
LICNNMDIARQLAFELDSLNQTRKEFEQEMKTEALAICANLPSLSQSQQAHGIVLYQADW
HQGVIGILASRIKDQFHRPVIVFAQESENSECLKGSARSISGLHMRDVLEHINMQYPALI
TKFGGHAMAAGLTIHQTQLNTFKQVFDQTINEILEPEQLQGIIHTDGELAEEDFTIANAE
MFRCSGPWGPHFPEPSFEGEFSILQQKLLSGKHLKLILQSEKGQLLEAIWFNIDISLFPD
LSAKKAKFVYKLDINEFRDNKTLQLKVEYMRYI
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaaattaattaaaaagcgtcctttattaacgactaaaaccttatctgaaaacccg
ctattaaatcgaatctatcaaagtagaggtataaaaacaacgaaagaattagaacacaat
ttccaacatttactcagaccacaacagcttgccaatattgaacaagcggttgatttatta
attaatgcttttgataaacaaagccgaattattattgttggcgattttgatgctgatggg
gcaaccagcacagcacttgcaattatcgcattgcgacgtttaggttttgaacaggttgag
tacttgattccagatcgtttttcgcaaggttatggtttaagcgttgcggttgcagaaatt
gttatagcaaagggggctgatttagttttaacagtggataatggtatttcttcgtttgaa
ggcgttgaattactgaaacagaatgatattcaagttctgattaccgatcaccatttacct
cctgaagcattacctattgctgatgcgatgatcaatcccaatttaccattttgtacattt
ccttccaaatcgttggcgggtgttggcgttattttttatgtgatgatggcgcttcgcact
agaatgcgagagcaaaaatattttcataataaagtagaaccaaattttgcagagctttta
gatttagttgctttaggcacggtagcggatgttgtaccgcttgaccaaaataatcgaatt
ttagtatatcaagggcttcaaagaatccgttctggtcattgccgtttggggataaaagca
ttagcggaagtgagtaagcgtgagcttttaaccttacaagcctcagatttaggttttgtg
attgcaccaagactgaatgcagcgggcaggcttgaaaatatgtctttaggcgttgagttg
ctaatttgtaacaatatggatatagctcgccagcttgcttttgagctagattcccttaat
cagactcgaaaagagtttgaacaagagatgaaaactgaagccttagcaatttgtgcaaac
ttgccaagtttgtctcaatctcaacaagcccacggtattgtgttatatcaagcagattgg
caccaaggtgtaattggtattcttgcttctcgcattaaagatcaatttcatcgtccagtt
attgtatttgcacaagaaagtgaaaatagtgaatgtttaaaaggttccgctcgttctatt
tcgggcttgcatatgcgagatgtgttggaacatattaatatgcaatatccagcgttaatc
actaaatttggtggacacgcaatggcagcaggtttgacaattcatcaaactcaattaaac
acctttaaacaagtttttgatcaaaccattaatgaaattttagaaccagaacaattacaa
ggtattatccatactgatggagagcttgcagaagaggatttcactattgcaaatgcggaa
atgtttcgttgctcaggaccttgggggccgcatttcccagagccaagttttgaaggtgag
tttagtattctgcaacaaaaattgttgtcaggtaaacatttaaagttgattttacaatcg
gaaaaaggccaattattagaggcgatttggtttaatattgatatcagtttatttccagat
ttgtcggctaaaaaggcgaaatttgtgtataaattagatataaatgaattcagagataac
aaaactttacaattaaaggttgaatatatgcgttatatttaa
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