Microcystis aeruginosa: MAE_45250
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Entry
MAE_45250 CDS
T00647
Symbol
sigD
Name
(GenBank) group 2 RNA polymerase sigma factor
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
mar
Microcystis aeruginosa
Brite
KEGG Orthology (KO) [BR:
mar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mar03021
]
MAE_45250 (sigD)
Transcription machinery [BR:
mar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MAE_45250 (sigD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
HTH_10
HTH_24
HTH_29
MerR
HTH_Mga
MerR_1
Motif
Other DBs
NCBI-ProteinID:
BAG04347
UniProt:
B0JTP4
LinkDB
All DBs
Position
complement(4161423..4162379)
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AA seq
318 aa
AA seq
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MKTSKNPTDPVRAYLREIGRVPLLTHEEEILYAKQVQRLIFLEKIKESLKVKLGSDPSDR
QWSEAAEISEEQLRRELGAGDFAKRKMVEANLRLVVSVAKKYLKRNLDLLDLIQEGTIGM
QRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKSRTIRLPIHITEKLNKIKKAQRQLAQ
DKGRAATIAELAEELDLTPKQVRDYLERSRQPLSLDLKVGDNQDTELGELLEDTGLSPED
YTAYSSLQVDLEKLMADLTPQQKEVICLRFGLDNGQPLTLAKIGVRLNISRERVRQIERE
AIAKLRKRKGNIREYLAS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacctcgaaaaaccccaccgatccagttcgcgcctatctcagagaaattggccga
gttccccttctcacccatgaagaagaaattctctacgcgaaacaggtacaaagattaatt
tttctggaaaaaatcaaagaatccctaaaggtgaaactcggcagcgaccccagcgatcgc
caatggtcagaagcggcggaaattagtgaagaacaactccgtcgagaattgggggcaggg
gatttcgccaaacgcaagatggtagaagcgaacctgcgtctagtggtttccgtcgctaaa
aaatacctaaaacgcaatctagatctattagaccttatccaagagggaacgattgggatg
caaagaggtgtggaaaaattcgatcccaccaaaggctatcgcttttccacctatgcctat
tggtggattcgccaagccatcacccgggcgatcgcagaaaaaagtcgcaccatccgtctg
cccatccacatcaccgaaaaactgaataaaatcaaaaaagcccagcgtcaactagctcaa
gataaaggtcgcgctgccaccattgccgaattagccgaggaattagacctaactcccaaa
caggtgcgagactacttggaaaggtcccgtcaacccctttcccttgacttaaaggtgggg
gacaatcaagacacggaattaggggaactcttggaagatacgggactttcccccgaagat
tacactgcctattcttccctccaagtggatttggaaaaactgatggcagacctcacccct
caacaaaaagaagtgatttgtctgcgttttggtttagataatgggcagcccctcacccta
gcaaaaattggcgttcgactcaatatcagtcgtgaacgcgtgcgtcagatcgaacgagaa
gcgatcgctaaattaagaaaacgcaagggcaacatcagagaatatctagctagttaa
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