Marinobacter sp. Arc7-DN-1: D0851_12490
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Entry
D0851_12490 CDS
T05619
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
mara
Marinobacter sp. Arc7-DN-1
Brite
KEGG Orthology (KO) [BR:
mara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mara03032
]
D0851_12490 (gyrB)
03400 DNA repair and recombination proteins [BR:
mara03400
]
D0851_12490 (gyrB)
Enzymes [BR:
mara01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
D0851_12490 (gyrB)
DNA replication proteins [BR:
mara03032
]
Prokaryotic type
DNA Topoisomerases
D0851_12490 (gyrB)
DNA repair and recombination proteins [BR:
mara03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
D0851_12490 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GyrB_insert
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AXS83777
UniProt:
A0A346S2F1
LinkDB
All DBs
Position
complement(2658679..2661093)
Genome browser
AA seq
804 aa
AA seq
DB search
MSESNYNSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFELVDNSIDEALAGHCSEI
GVVIHPDESVTVKDNGRGIPVDLHEEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVG
VSVVNALSSTLTLTIRRDGKVYEQTYTHGVPDAPLGPVGETDASGTKVHFIPSPETFTHI
EFHYDILAKRLRELAFLNSGVRIRLTDERSGREEVFEYEGGLRAFVEHLNTNKTPINRVF
HFNREREDGIAVEVAMQWNDAFQENLYCFTNNIPQRDGGTHLAGFRAALTRSLNNYIEHE
GLGKKAKVATSGDDAREGLTAIVSVKVPDPKFSSQTKDKLVSSEVKTAVEQELYQSFADY
LQEQPNEAKLIVNKMIEAARAREAARKARDMTRRKGALDIAGLPGKLADCQEKDPALSEL
YIVEGDSAGGSAKQGRDRKTQAILPLKGKILNVEKARFDKMLSSAEVGTLITALGCGIGR
EEFNPDKLRYHSIIIMTDADVDGSHIRTLLLTFLFRQMREIIERGHVFIAMPPLYKVKRG
KQEQYLKDEKAKEAYLTQTALEGAQLYVNPEAPAIKDSALETMVKDYQAVMAMIGRLSRA
YPAKVLEQMLQNITLKSEHLKDEETVTRWVARLGEGLDLDTRTGTKYTFSVTKDPERDLY
LPKVTIYVHGIPHEHVFSHEFFESSSYGAIARMGETLDGLIEEGAYIQRGERKQPVLSFE
GALDWLMKEAQRGLSIQRYKGLGEMNPDQLWETTMDPETRRMMKVTIEDAFAADQIFTTL
MGDDVEPRRNFIQTNALEVTNLDI
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaatcgaactacaattcctccagtatcaaagtcttgaagggactggatgcggtg
cgaaaacggcccggcatgtacatcggtgataccgatgatggcacaggcctgcaccacatg
gtctttgaattggtggataactccatcgatgaagcgctggcgggccactgctccgagatc
ggcgttgttattcaccccgatgaatcggtaacggtaaaagacaatggtcgtggtattccg
gtggacctgcacgaggaagaaggcgtctccgccgccgaagttatcatgacggttctgcac
gccggtggtaaatttgatgataattcctacaaggtctccggtggtctgcatggcgtaggc
gtgtcggttgttaatgccttgtcctctaccctgaccctgaccattcgtcgcgatggcaag
gtctacgagcaaacctatacccacggtgtaccggacgcccctttgggccccgttggtgaa
accgacgcatccggtaccaaggttcacttcattccgtcaccggagaccttcacccatatc
gaattccactacgacattctggccaagcgcctgcgggagcttgcgttcctgaacagtggt
gtgcgcattcgtctcacagacgagcgcagcggcagagaagaagtgtttgaatacgaaggc
ggtttgcgggcatttgttgagcatctgaacaccaacaagacgccgattaaccgggtgttc
cacttcaaccgtgagcgtgaagacggcatcgccgtggaagtggcgatgcagtggaacgat
gccttccaggaaaacctttactgtttcaccaacaacattccccagcgggatggtggtact
cacctggccggtttccgcgccgccctgacccggtccctgaacaactatatcgagcacgaa
ggcctcggtaagaaagcgaaggtcgctacgtctggtgatgatgcccgggaaggcctgacc
gcgattgtcagcgtcaaggtcccagatccgaagttttcttcccagaccaaagacaagctg
gtgtcgtcggaagtgaaaactgcggtcgagcaggagctgtatcagagcttcgccgattac
cttcaggaacagcccaacgaagccaagctgatcgtcaacaagatgattgaagcggccagg
gcccgtgaggcggcgcgcaaggcccgtgatatgacccgtcgcaagggcgctttggatatt
gccggcctgcctggaaaactggcggattgtcaggagaaggatccggcactttcagaactg
tacattgtggagggtgactcggccggtggcagtgccaaacagggccgggaccgcaagacc
caggcgatcctgccgttgaagggcaagatcctgaacgtggagaaagcccggttcgacaag
atgctgtcctcagcagaggtcggtaccctgatcaccgcccttggctgcggaatcggccgg
gaggaattcaacccggacaaacttcggtaccattccatcatcatcatgaccgatgcggat
gtggacggctcccacatccgtaccctgctgctgactttcctgttccgccagatgcgcgaa
atcatcgaacgtggccatgtctttattgccatgccgccgctgtacaaggtcaagcgaggt
aaacaggaacagtacctgaaggatgagaaagccaaggaggcctacctcacccagacggct
ctggaaggcgcacagctgtacgtaaaccctgaagcaccggcgatcaaggactccgcgctg
gaaaccatggttaaggactatcaggccgtgatggccatgatcggaaggctgtcccgggcg
tatcccgccaaggtgctggaacagatgcttcagaacatcactctcaagtcagagcacctg
aaggatgaagaaacggtgacccgctgggtcgcacgcctgggcgaggggctggatctggat
acccgtaccggcaccaagtacacgttctcggtcactaaggatcccgagcgggatctgtac
ctgccgaaggtcaccatctatgttcacgggattccccatgagcacgtcttcagccatgaa
ttctttgagtcgtcttcctacggcgctattgcccgcatgggcgaaaccctggatggcctg
attgaagagggtgcctatatccagcgtggtgagcgcaagcagccggttctgtcctttgaa
ggcgctctggactggttgatgaaggaagcccagcgtggcttgagtattcagcgttacaag
ggcctcggtgaaatgaacccggatcagctgtgggaaaccaccatggatccggaaacccgt
cgcatgatgaaagtgaccattgaagatgccttcgcggccgaccagatattcaccaccctg
atgggtgacgatgtggagccgcggcgtaactttatccagaccaacgctctggaagtcacc
aacctggacatttga
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