Marinobacter sp. Arc7-DN-1: D0851_12945
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Entry
D0851_12945 CDS
T05619
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mara
Marinobacter sp. Arc7-DN-1
Pathway
mara03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mara00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D0851_12945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mara03019
]
D0851_12945
Enzymes [BR:
mara01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
D0851_12945
Messenger RNA biogenesis [BR:
mara03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D0851_12945
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25
P-loop_SecA
HEM4
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AXS83847
UniProt:
A0A346S2M1
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All DBs
Position
2752726..2754048
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AA seq
440 aa
AA seq
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MSFSSLGLSEQLVRATTDQGYETPSPIQAQAIPAVLSGRDVMAAAQTGTGKTAGFTLPLL
QRLGETSRTGKGPRALILTPTRELAAQVHDSVNLYSKYVPTKAAVVFGGVKINPQMMKLR
KGLDVLVATPGRLMDLYQQNAVRFNEVEILVLDEADRMLDMGFIRDIRKILALLPAKRQN
LLFSATFSNEIRTLAEGLLDNPVQVEVAARNTAAENIRQSVYPVDQSQKTALLSKLVRDN
SWDQVLVFTRTKHGANRLTQKLEKDGITAAAIHGNKSQGARTRALADFKAGEVRVLVATD
IAARGLDIKQLPQVVNFELPNVPEDYVHRIGRTGRAGESGHALSLVSADEGKLLTGIERL
IKKQLPRKSMEGFEPTNNLPLKPKAKADPSRARTRSSNGAGNGRPGGKPKSFGDKPGGRS
GGRSQNGGGQRSRSAQRQSA
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgagtttttcttcactcggtttgtccgagcagctggtccgtgccaccaccgatcagggt
tatgaaacaccgtccccaattcaggcccaggccatccccgccgttctttccggccgggat
gtgatggctgccgcccagactggcaccggcaaaaccgccggtttcaccctgccgctgttg
cagcgtcttggcgaaacctcccgtaccggcaaggggccccgtgccctgatcctcacgccg
acccgggagttggcggcacaggttcacgacagcgtgaatctttacagcaaatacgttcct
accaaggccgctgtggttttcggtggtgtgaaaatcaatccgcagatgatgaagctgcgc
aagggtctggacgtattggtggcaacaccgggccggctgatggacctgtatcagcaaaac
gctgtgcgcttcaacgaagtggaaattctggtgctggacgaagccgaccgaatgctggac
atgggctttatccgcgacatccgcaagattcttgcgctgttgccggccaagcgccagaac
ctgctgttctccgccaccttctctaacgagatccgtactcttgcggaaggcctgctggat
aacccggtgcaggtggaagtagcggcccgtaacaccgctgcggaaaacatcaggcagtct
gtctacccggtggatcagagccagaaaacggcgctgctgagcaagctggtacgtgacaat
agctgggaccaggtactggtctttacccgtaccaagcacggcgccaaccgcctgacccag
aagctggagaaggacggtattaccgccgccgccattcacggcaacaagtcgcagggtgcc
cgcacccgtgcgctggctgacttcaaggccggcgaagtgcgtgtgctggtggcgacggac
atcgcagcccgtggtctggacatcaagcaactgccccaggtagtgaactttgaactgccc
aacgtaccggaagattacgtgcaccgtatcggccgtaccggccgtgctggtgagagcggt
catgcgttgtcactggtgagtgcggatgaaggcaaactactgacgggtatcgaacggctg
atcaagaagcagttgccgcgcaagagcatggaaggcttcgagcccaccaacaacctgccg
ctgaagcccaaggccaaggcagaccccagccgcgcccgtacccgcagtagtaacggcgct
ggcaatggccggcccggaggcaagccgaaaagctttggggacaagccaggtggccgcagt
ggtggccggagccagaatggcggcggtcagcgaagccgctcagcccagcgccagagtgcc
tga
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