Marinobacter sp. Arc7-DN-1: D0851_19780
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Entry
D0851_19780 CDS
T05619
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mara
Marinobacter sp. Arc7-DN-1
Pathway
mara03030
DNA replication
mara03430
Mismatch repair
mara03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mara00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D0851_19780
03430 Mismatch repair
D0851_19780
03440 Homologous recombination
D0851_19780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mara03032
]
D0851_19780
03400 DNA repair and recombination proteins [BR:
mara03400
]
D0851_19780
Enzymes [BR:
mara01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D0851_19780
DNA replication proteins [BR:
mara03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D0851_19780
DNA repair and recombination proteins [BR:
mara03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D0851_19780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
AXS85053
UniProt:
A0A346S627
LinkDB
All DBs
Position
4225440..4228922
Genome browser
AA seq
1160 aa
AA seq
DB search
MSQTFVHLRVHSEYSMVDGLVRVKPLINRVAELGMPAVGLTEQSNMCSLVRFYKAAMGAG
VKPIIGADIWLENPDEPDNPFRVTLLARDNDGYLNLTEIISLGYTEGQRFGKPIIQRKWL
EARPKGLIALSGSKMGDVGKALLAGKPELASERARYWMELYPESYYLELQRTGRPGDEDC
LHLSVELAQALALPVVATNDVHFLDADDFEAHEARVCIGESRTLDDPRRDRRFSDQQYLR
SAGEMIELFSDIPEAIENTVEIARRCSVKVRMGEYFLPNYPIPDGMTIDEYFRKVSEEGL
EERLAKTLSKDDPEYDAKREAYYTRLNFELDIIIQMGFPGYFLIVMDFIKWAKNNGVPVG
PGRGSGAGSLVAYAQLITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMEGRDRVIAYVA
EKYGREAVSQIITFGTMAAKAVVRDVARVQGKSYGLADKLSKMIPFEPGMTLEKALIQEP
QLKDFLDQDEEAQEIWEMALKLEGVCRNAGKHAGGVVIAPTKITDFSPLYCDDEGGSLVT
QFDKGDVEDAGLVKFDFLGLRTLTIIDWALKMINPRREKRGLPALDINEIPLADAPSFDM
LKKAETTAVFQLESRGMKDLIRRLQPDSLEDMIALVALFRPGPLQSGMVDDFIDRKHGRQ
PMSFPHPDYQYEGLKPVLEPTYGVILYQEQVMQIAQVMAGYTLGNADMLRRAMGKKKPEE
MAKQKQFFLDGCEKNGINKTLAENIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYP
AEFMAAVLTADMQNTDKVVTLVEECRTMKLDLLVPDVSRSEYTFTVNDEGQIVYGLGAIK
GLGEGPIQSIVEGRGEGGPYQDIFDFCRRVDLKKVNKRAMEALIRSGAMDKLGAGRAQLM
ASIEKAVQQADQQSRNESVGMMDMFGEMLEAGDGGDPYEDVAGIREWPEKQRLKGEKDTL
GLYLTGHPFDEYEKEVRRFVRSSIADLKPNKSPQRVAGLVVAQRTMKTRTGSTMCFITLD
DRSARIEATLFSEAFFENRELLQSDQVIVVEGQVSHDDYSGQMKMRVSSVMDVATARQQF
SRGLKLNLHADQLRNGLLEKLDSTLRPFRCEGSPVWIEYSSPEASTRIELGESWRVQPDD
NLLLELRYLVGDQSVELVYD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagacttttgtacacctccgtgtccattccgagtactccatggtggatggcctg
gtacgggttaagccgctgatcaaccgtgttgctgagctgggcatgcccgcggtggggctg
accgaacagtccaacatgtgctcgctggtgcgtttctacaaggcagccatgggggcgggc
gtaaagcccattatcggcgccgatatctggcttgaaaacccggatgagcccgataatccg
ttccgggtgacactgctggcccgggataacgacggctacctgaatctgaccgagatcatt
tccctgggttacaccgaaggccagcgcttcggaaaaccgatcatacagcgcaaatggctt
gaggcccgcccgaagggcctgattgcgctctccggcagcaaaatgggggatgtcggtaag
gcgcttctggcaggcaaaccggaactggccagtgagcgcgcccgttactggatggagctg
tacccggaaagctattacctggaattgcagcgcaccggccgcccgggggacgaagactgc
ctgcacctgagtgtcgagctggcccaggcattggccctgccggtggtggccaccaacgat
gtccacttcctggatgcggatgatttcgaggcccacgaagcccgggtgtgcatcggcgag
agccgtaccctggatgacccccgtcgtgaccgtcgcttcagtgaccagcagtacctgcgc
agcgccggggaaatgatcgagctgttcagcgacatcccggaagcgatcgagaacacggtg
gagatcgcccgccgctgttcggtcaaggtccgcatgggtgaatacttcctgccgaactac
ccgattccggacgggatgaccatagacgaatacttccgcaaggtatcggaagaaggcctg
gaagaacgacttgccaaaaccctgagcaaagacgacccggaatacgatgccaagcgcgag
gcctactacacacgcctgaatttcgagctggacatcatcatccagatgggattcccgggc
tacttcctgatcgttatggactttatcaagtgggccaagaacaacggcgtgccggtcggt
ccgggtcggggctccggtgccggctccctggtcgcctatgcccagctgatcaccgacctg
gaccccctggaatacgacctgctgttcgagcggttcctgaacccggagcgggtttccatg
cccgatttcgacgtcgatttctgtatggaagggcgggaccgggtgattgcctatgtggcc
gagaaatacggccgggaggcggtctcccagatcatcaccttcggtaccatggcagccaaa
gcggtggtgcgtgacgttgcccgggtgcagggcaaatcctacggcctggcagacaaactc
tccaagatgattccctttgagccgggaatgaccctcgagaaggccctgattcaggagccc
cagctcaaggactttttggatcaggacgaagaggcccaggaaatctgggaaatggccctg
aagctggaaggggtctgccgcaacgccggcaagcacgctggcggtgtggttattgccccc
accaagatcaccgatttctcgcccctgtactgcgacgacgagggcggcagcctggtcacc
cagttcgataaaggcgatgttgaagacgccggcctcgtaaagttcgacttcctcgggctg
cggacgctgacgatcatcgactgggctctgaagatgatcaatcctcgccgggaaaagcgg
ggattgccggcactggatatcaacgagattcccctggcggatgcgccctcgttcgacatg
ctgaaaaaagcggaaaccacggcggtgttccaactggaatcccggggtatgaaagacctg
atccggcgcctccagccggattccctggaagacatgatcgccctggtggccctgttccgc
cccgggccgctgcaatccggcatggtggacgactttatcgaccggaagcatggtcggcag
cccatgtcgttcccgcacccggattatcagtacgagggtctgaaacctgtcctggagcct
acctacggggtcatcctgtaccaggagcaggtcatgcagatcgcccaggtgatggcgggc
tacacgcttggtaacgctgacatgctgcgccgggccatgggcaagaaaaagcccgaggaa
atggcgaaacagaagcagttttttctggacggttgtgaaaagaatggcatcaacaagacc
ctggcagaaaacattttcgacctggtggaaaagtttgccggttacggtttcaacaaatcg
cactcggccgcctatgccctggtgtcctaccagaccctgtggctgaaggcccattacccg
gcggagttcatggccgcagtgcttaccgcggatatgcagaataccgacaaggtggtcacc
ctggtcgaagaatgccggactatgaagctggatctgctggtgccggatgtcagtcgctct
gaatataccttcacggttaacgatgagggccagatcgtctatggtctcggcgccatcaag
gggttgggtgaggggccgatccagagcattgtggaagggcgcggagaaggcgggccgtac
caggatatttttgatttctgccggcgggtcgacctgaaaaaagtcaacaagcgggccatg
gaggccctgatccgctccggtgccatggacaaactcggtgctggccgggcccagttgatg
gcgagcatcgaaaaggccgtgcaacaggccgaccagcaatcccgcaacgaatctgtcggc
atgatggacatgttcggcgaaatgctggaggccggtgacggcggcgatccgtacgaagat
gtcgccgggattcgagagtggcctgaaaagcagaggctcaagggggagaaggataccctg
gggctttacctgaccggccatccgttcgatgaatatgagaaagaggtacggcggttcgtg
cggtcatccattgccgacctgaaacccaacaaatcgccccagcgggttgccgggctcgtg
gtggcccagcgcaccatgaaaacccgcaccgggtccaccatgtgttttataacactggat
gaccggagtgcccggattgaggcgaccctgttctcggaagcgtttttcgagaatcgggag
ctgctgcaatccgatcaggtgattgtggtggaggggcaggtgagccacgatgactactcc
ggtcagatgaagatgcgggtgagttcggtgatggatgtcgccacagcgcgccagcagttc
agtcgcggactgaagctgaatctccatgccgatcagctgcggaatggtctgcttgaaaaa
ctggacagcaccttgcggcccttccgctgcgaaggcagcccggtgtggattgagtacagc
agtcctgaggcttcaacccggatcgagctgggtgagtcctggcgggtccagcccgacgat
aacctgttgctggagctccggtatctcgtaggcgaccagtcggtagaactggtctatgat
taa
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