Methanogenic archaeon ISO4-H5: AR505_0391
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Entry
AR505_0391 CDS
T04272
Name
(GenBank) formamidopyrimidine-DNA glycosylase MutM
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
marc
Methanogenic archaeon ISO4-H5
Pathway
marc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
marc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AR505_0391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
marc03400
]
AR505_0391
Enzymes [BR:
marc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AR505_0391
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AR505_0391
DNA repair and recombination proteins [BR:
marc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AR505_0391
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
zinc-ribbons_6
DUF6487
Motif
Other DBs
NCBI-ProteinID:
AMH94112
UniProt:
A0A0X8V030
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All DBs
Position
complement(376230..377078)
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AA seq
282 aa
AA seq
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MRRVPELPEIETVRRVVCPQITGAKIVSVAVGREKIVGHPSMTEFIRKLEGRTVVSDDRK
GKALVIILDRGKLIIRFGMTGQLIVVPEGYPPEKHTHVTLRLEDGREVWYIDPRMFGKVW
YIDEDEEDTYSGIGRLGLEPDDPEMDWRFLKGKLGKRSLTIKEALLDQSVVAGIGNIWSD
EILFRCKVCPETPCSSLSDAKWKLLAKTIPEVMKFGIEKNAITPAEYLEGKGRKYYDIYY
LEAYGHEGDPCPRCGKEMVRTVIGGRSSYWCPRCQRKPRCRN
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgaggagagtgcccgagcttcccgagattgagaccgtccgccgtgtagtctgtccgcag
ataaccggtgctaagatcgtgtccgtcgctgtcggccgcgagaaaatcgtcggccaccca
tccatgacggagttcatcaggaaattggagggcagaaccgtcgtatcggatgacaggaag
ggcaaagcgctcgtcatcattctcgaccgcgggaaactgattatcagattcggaatgaca
ggtcagctcatcgtcgttcccgaaggataccctccggagaaacacacccacgtcaccctc
cgtctggaggacggaagggaggtttggtacatcgatccccgcatgttcgggaaggtgtgg
tacatagacgaggatgaagaggacacatactccgggatcggacgtctgggtcttgagccg
gatgaccctgaaatggactggagattcctcaaagggaaactgggtaaaaggtcgctcacg
atcaaggaagcactgctagatcagtcggtggttgccggtatcggtaacatctggtcggat
gagatactcttccgctgcaaggtatgccccgagactccctgttcgtcgttatcggatgcc
aaatggaaactgctcgcgaagacgattccggaggtcatgaagttcggaatcgagaagaac
gccatcactcccgccgagtatctggaaggcaagggcaggaagtactacgacatctactat
ctggaagcatacgggcatgagggcgacccctgtcccagatgcggaaaggagatggtgagg
acggtcatcggcggcaggagcagctactggtgcccccgctgtcagaggaaaccgcgctgc
cgcaactga
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