Marinomonas arctica: IBG28_01265
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Entry
IBG28_01265 CDS
T06902
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mard
Marinomonas arctica
Pathway
mard03030
DNA replication
mard03410
Base excision repair
mard03420
Nucleotide excision repair
mard03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mard00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IBG28_01265 (polA)
03410 Base excision repair
IBG28_01265 (polA)
03420 Nucleotide excision repair
IBG28_01265 (polA)
03440 Homologous recombination
IBG28_01265 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mard03032
]
IBG28_01265 (polA)
03400 DNA repair and recombination proteins [BR:
mard03400
]
IBG28_01265 (polA)
Enzymes [BR:
mard01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IBG28_01265 (polA)
DNA replication proteins [BR:
mard03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
IBG28_01265 (polA)
DNA repair and recombination proteins [BR:
mard03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
IBG28_01265 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IBG28_01265 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
QNT07976
UniProt:
A0A7H1JBW0
LinkDB
All DBs
Position
complement(294973..297726)
Genome browser
AA seq
917 aa
AA seq
DB search
MVLVDGSSYLYRAFHAIPPMHTSDGHPTNATRGVISMIRSLIKTYPNSPMVIIFDAKGKT
FRDDIYSEYKAHRPPMPDDLRPQIEPIHRMVEAMGLPLVIIDGVEADDVIGTIAKQVGEQ
GREVIVSTGDKDMAQLVTENVTLVNTMNNTVMDIQGVKDKFGIPPELIIDYLALMGDKVD
NIPGVPGVGEKTALALLQGLGSIKDIYNRLDEIADLGFRGSKTMKQKMADNQEMAELSYT
LATIKCDVELPFDPQDLKNGEADKDTLREWYTKLEFKTWLSDLDNAPSVGSASDTVGNIA
AEQKDGQVDTPIASDLEANYETILDKASFNKWLEKIQAAELVAFDTETTSLNYMAAELVG
VSFSVQAGEAAYVPVAHDYEGAPEQLDRDWVLEQLKPWLEDDKQAKVGQHLKYDANVLNN
YGITLRGIAYDTMLESYVYNSVSSRHDMDTLASKFLGHTNVSFEDIAGKGAKQKTFNQID
LEVAAFYAAEDADITLRLHQAIWPKIETTPELVSIFKDIECPLIPVLAKMEQTGALIDPE
LLHIQSSEIAGKLQELEIKAHEEAGESFNLSSPKQLQVILFEKQGLPVIKKTPKGQPSTA
EPILQELAQDYELPRLIMEHRSLSKLKSTYTDKLPEMIQKTGRIHTSYHQAITATGRLSS
TDPNLQNIPIRSAEGRRIRQAFIAPAGYKLVAADYSQVELRIMAHLSQDPGLLDAFTKDA
DVHKATAAEVFEVSLDDVTSEQRRRAKAINFGLIYGMSAFGLAKQLGIGRPEAGKYIKRY
FERYPGVQQYMENTRESAKEKGYVETIYGRRLYLPDIKAKNAMMRQAAERTAINAPMQGS
AADIIKRAMIKMHDWLAETDLDVKMIMQVHDELIFEVAEKDIDAAKEKIVDIMQNSSQID
VPLLVEAGVGNNWDEAH
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggttctggtagacggctcgtcttacctttaccgagcattccacgcgattccaccgatg
cacaccagcgacggccacccaaccaacgccacgcgcggtgtgatcagcatgatccgcagc
ctcatcaaaacctacccaaattcacccatggtcatcatcttcgacgccaaaggcaaaacc
ttccgcgacgacatttacagcgaatacaaagcccaccgtccgcccatgccagacgacctt
cgcccacaaatcgaaccgattcaccgcatggtggaagccatgggcttgccgctggtcatc
atcgatggcgtagaagccgacgacgtgatcggcaccatcgccaaacaagtgggcgagcaa
ggccgcgaggtcattgtctccactggcgataaagacatggcgcaactggtcacagagaac
gtcacccttgtgaacaccatgaacaacaccgtcatggacatccaaggcgtgaaagacaaa
ttcggcatcccacccgaactcatcatcgattaccttgcactcatgggcgataaagtcgac
aacatccccggcgtaccgggcgtaggtgagaaaaccgccctagccttattgcaaggtctt
ggcagcatcaaagacatttacaatcgcctagacgaaatcgccgatttgggcttccgtggt
tctaagaccatgaaacaaaaaatggccgacaaccaagagatggccgagctgtcttacacc
ctagcaaccatcaaatgcgacgtggaactgcccttcgatccacaagatctgaaaaacggc
gaagccgacaaagacaccctacgtgagtggtacaccaagctagaattcaaaacctggctc
tccgatctagacaacgcgccaagcgtcggaagcgccagcgacacagtcggcaacatcgcc
gctgaacaaaaagacggccaagtcgatacgccaatcgcatcggatctcgaagccaattac
gaaaccatcttagacaaagccagcttcaacaaatggctagaaaaaatccaagccgccgag
ctggttgccttcgatacagaaaccacctcgctgaactatatggctgccgagctggttggc
gtgtctttttccgtgcaagcaggcgaagccgcttacgttccggtggcccacgactacgaa
ggtgcgccagaacaactagaccgcgattgggtgctagaacagctgaaaccttggctcgaa
gacgataagcaagcgaaagtcggccaacacctaaaatacgacgccaacgtactaaacaac
tacggcatcaccttgcgcggcatcgcctacgacaccatgttggaatcttacgtgtacaac
tccgtaagctcccgccacgacatggacacccttgccagtaaattcctcggccacaccaac
gtgagctttgaagacattgccggcaaaggcgcgaagcaaaaaaccttcaaccaaatcgac
ctagaggtcgccgcgttttatgccgcagaagacgccgacatcaccttgcgtttgcatcaa
gcgatttggccaaaaatcgaaaccacgccagaattggtcagcatctttaaagacatcgaa
tgcccactgattccggtattggcaaaaatggaacaaactggcgccttgatcgacccagag
cttctgcatattcaaagcagcgaaatcgctggcaaactgcaagaactggaaatcaaagcc
cacgaagaagcgggcgaaagcttcaacctcagctcaccaaaacagctgcaagtcatcttg
tttgaaaaacaaggcttgcccgttatcaaaaaaacgccaaaaggccagccatctaccgcc
gaaccaatcttgcaagaactggcgcaagactacgaactgcctcgcttgatcatggaacac
cgcagcctgtctaagttgaaatccacttacacagacaaactgccagagatgatccagaaa
accggccgcattcatacctcgtaccaccaagccattaccgccacaggtcgtttgtcgtcg
actgatccaaacttgcagaacatcccgattcgttctgctgaaggtcgtcgtattcgccaa
gccttcatcgcacctgctggctacaaactggtcgcggccgactactcacaagtcgaatta
cgcatcatggcgcacttgtcgcaagatccgggcttattagacgccttcaccaaagacgcc
gacgtgcacaaagccaccgccgcggaagtcttcgaagtcagcttagacgacgtcaccagc
gaacaacgccgccgcgccaaagccatcaacttcggcttgatctacggcatgtccgccttt
ggcctcgcgaaacagcttggcattggtcgcccagaagcaggcaaatacatcaaacgctac
ttcgaacgttacccaggcgtacagcaatacatggaaaacacccgcgaaagcgcgaaagaa
aaaggctacgtagaaaccatctacggccgccgcttgtacttgccagacatcaaagcgaaa
aacgccatgatgcgccaagccgccgaacgcaccgcgatcaacgcccccatgcaaggctcc
gccgccgacatcatcaaacgcgccatgatcaaaatgcacgactggctagcagaaaccgac
ctagacgtgaaaatgatcatgcaagtacacgatgaactcatcttcgaagtggctgaaaaa
gacatcgacgccgccaaagagaaaatcgtcgacattatgcagaatagtagtcagatagac
gtgcctttgcttgtggaagcgggagttgggaacaactgggacgaggcgcattga
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