Marinomonas arctica: IBG28_04540
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Entry
IBG28_04540 CDS
T06902
Symbol
ispA
Name
(GenBank) (2E,6E)-farnesyl diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
mard
Marinomonas arctica
Pathway
mard00900
Terpenoid backbone biosynthesis
mard01100
Metabolic pathways
mard01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
mard00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
IBG28_04540 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
mard01006
]
IBG28_04540 (ispA)
Enzymes [BR:
mard01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
IBG28_04540 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
IBG28_04540 (ispA)
2.5.1.29 geranylgeranyl diphosphate synthase
IBG28_04540 (ispA)
Prenyltransferases [BR:
mard01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
IBG28_04540 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
QNT06914
UniProt:
A0A7H1J8U8
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All DBs
Position
complement(984220..985101)
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AA seq
293 aa
AA seq
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MTLNDFSQYARQRVDAYLTHNLDQYKPADHLQEAMAYSLFNGGKRVRPMLTYAAASLFGE
ANSLTDACAAAIESIHAYSLIHDDLPAMDDDDLRRGKPTCHIQYDEATAILAGDALQTFA
FELLSNAKHQNTQTQLQLIQELVFASGRHGMVTGQMIDLANVGKDIDIKALEQMHQHKTG
ALIRASIRMGAISTGAHNEAELAALDAYATAIGLAFQVQDDIIDITSDTTTLGKTQFSDE
DANKPTYPKLLGLEGAQALAQSLHKQAITAISPFGDAAQPLVELANYIIGRNH
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
gtgacgctaaacgatttttctcaatatgcacgtcagcgcgtagatgcataccttacgcac
aatttagaccaatataaacccgcagatcatttacaggaggccatggcatacagcttattt
aatggcggcaaacgcgttcgcccgatgttgacctatgccgcagcgtccttatttggtgaa
gccaatagccttaccgatgcttgcgcagcggcaattgagtccattcatgcctattctcta
atccacgacgaccttccagccatggacgacgatgacttacgccgtggcaaacccacttgc
catatacaatacgacgaggcgacagctatcttggcaggcgatgcattacaaacgtttgct
ttcgaattattaagcaacgccaaacaccaaaacacacaaacccagctacaattaattcaa
gaactggttttcgcttcaggccgccatggcatggtcacaggacaaatgattgacctagcc
aacgtgggcaaagatatcgatattaaggcccttgaacaaatgcaccaacacaaaaccggc
gcgctcattcgtgccagtatccgtatgggcgccatcagtactggcgcacacaacgaggca
gaattggccgcattagacgcttatgccacagcgattggactcgcctttcaagtgcaagat
gacattatagacatcaccagtgataccaccacactgggtaaaacacagttttcggatgaa
gacgcaaacaagccaacgtaccctaaactgcttggtttagaaggcgcacaagcacttgct
caaagcctacataaacaagccattactgcgatttcaccttttggtgacgctgctcagcct
ttagttgagcttgcgaactatattattggccgcaaccactga
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