KEGG   Marinobacter sp. CP1: ACP86_01265
Entry
ACP86_01265       CDS       T04052                                 
Name
(GenBank) ribonuclease
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
mari  Marinobacter sp. CP1
Pathway
mari03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mari00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ACP86_01265
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mari03019]
    ACP86_01265
   03009 Ribosome biogenesis [BR:mari03009]
    ACP86_01265
Enzymes [BR:mari01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     ACP86_01265
Messenger RNA biogenesis [BR:mari03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     ACP86_01265
Ribosome biogenesis [BR:mari03009]
 Prokaryotic type
  rRNA processing factors
   ACP86_01265
SSDB
Motif
Pfam: RNase_E_G RNase_E_G_Thio S1
Other DBs
NCBI-ProteinID: AKV94905
UniProt: A0A0K1U579
LinkDB
Position
272168..275401
AA seq 1077 aa
MKRMLINATHPEELRVALVDGQRLFDLDIESSSREQKKANIYKGRITRVEPSLEAAFVDF
GAERHGFLPLKEISKEYFKKSPGQIEGKINIKDVVSEGQEVIVQVDKEERGNKGAALTTF
ISLAGRYLVLMPNNPRAGGISRRIEGDERAQLKEAMNDVQVPKSMGIIVRTAGIGRTTEE
LQWDLDYLVQFWEAITQAAGERKAPFLIHQESNVIIRAVRDYLRQDIGEVLIDANGVYED
VLNFVRAVMPTFENKIKLYKDEIPLFSRYQIEGQIETAFQREVKLPSGGSIVIDPTEALV
SIDINSSRATKGQDIEETALQTNLEAAEEIARQLRLRDMGGLIVIDFIDMTPAKHQREVE
QKMREALEIDRARVQVGKISRFGLLEMSRQRLRPSLGETRSEVCPRCEGQGTIRGIESLA
LSIMRLIYEESSKDKTGEVRAVVPVSVATFLLNEKRKQLADIEARQEVSVVVVPVPHMET
PHFEIIRMRQDETTPEHISSHQVAQEYSEREEEIFEAPTPEKPVREQAAVKAIRPSAPAP
APAPAAPKADETTEQEEGLFRRLGRKIAGFFSGEEEQKVENREQSQSQREDRRNQGRQDR
RKSRVARGDDQRAGGNRSGNERRQGGQQGRGDDNRGRGRNRNDDQNRGNQNRQASENKGQ
DNRGGDNKSADNKGSENRRDNRRDNQGRGRNRPQRDPKDNREQKDQKDQGQQDNAAKSGP
ADKTGSEEKRRKPRRQRNRDGSPSEAPASAPADRKAARSEKHQKDTQPENGRDDAKPEVK
TEQVKETVNKASDKPETRAETAPAASETPKPEAAQKEPVKEQKPEKASADKAPSESKPEA
KPAAETKPVAESPVEKQEAVQAKPEKAEPAKAEQSSEPLEKPEEKSENVTEQAQGAATDK
EPAKSTAATDEPKPVTDQATEKKEAAPRSKPESRATADGEQAPRAKKQPAKPKEAPAAKA
EPEEAPQPEKAEKPAEEKVAPERKAPEAQPEPKQPEPAQASPEKAEPKKAEPEKVEAKTA
EPVKEETPSAPEATAKDTPADAPAVDVPVTPGRAYNDPREVRKRQKAAEEAKKAGSN
NT seq 3234 nt   +upstreamnt  +downstreamnt
atgaaaagaatgcttatcaatgcaactcatcccgaagagttgcgcgtcgccctggttgac
ggccagcgtctattcgaccttgatatcgaatccagctcccgcgagcagaagaaagccaat
atctacaagggccgcattacccgggtcgagcccagtctcgaggccgcatttgtggatttc
ggcgccgagcgacacggctttctgccgttgaaggaaatttccaaggaatacttcaagaag
tcgcccggccagatcgaaggcaaaatcaacatcaaggacgttgtttccgaaggccaggaa
gtcatcgtgcaggtcgataaggaagagcgtggcaataagggcgcagccctgaccacgttt
atctccctggcaggtcgctatctggtactcatgcccaacaacccccgtgctggcggcatc
tcccgtcgcattgagggcgatgagcgggcgcagctcaaagaagcgatgaacgatgttcag
gtgccgaaatccatgggcatcatcgttcgtaccgccggcatcggccgtaccactgaagaa
ctccagtgggatctggactacctggtgcaattctgggaggccatcactcaggccgccggc
gagcgcaaggcccccttcctgattcaccaggaaagcaacgttatcatccgtgcggtccgt
gactaccttcgccaggacatcggcgaggttctgattgacgctaatggcgtctatgaggac
gtcctgaatttcgttcgtgcggtcatgcccaccttcgaaaacaagatcaagctgtacaag
gatgaaatcccgctgttcagccggtaccagatcgaaggccagatcgagaccgccttccag
cgggaagtgaaactgccctccggcggctccatcgtgattgacccgaccgaggccctggtt
tccatcgacatcaactcttcccgcgccacgaaaggccaggatatcgaggaaaccgcgctc
cagaccaacctggaagcggcagaggaaatcgcccgccagctgcgcctgcgtgacatgggc
ggcctgattgtcatcgactttatcgacatgacgcctgcgaagcatcagcgggaagttgaa
cagaagatgcgtgaggccctggaaatcgaccgggcccgggttcaggtgggcaaaatctcc
cgcttcggcctgctggaaatgtcccgtcagcgcctgcgcccttccctgggagagacacgc
agcgaagtgtgcccccgatgtgaaggtcagggcactattcgtggcatcgagtccctcgcc
ctgagcatcatgcgcctgatctacgaggaatcgtcaaaggataagaccggcgaagtacga
gccgttgtgccggtttccgtcgccactttcctgctcaacgagaagcgcaagcagctggcc
gacattgaagcccgccaggaagtgagcgttgtcgtggtgccggttccgcatatggagaca
ccgcatttcgaaatcatccggatgcgccaggatgaaacaacgcccgagcacatttccagc
catcaggtggcccaggagtacagcgagcgtgaagaagaaatcttcgaggcgcccacccct
gagaagccggtacgcgaacaggctgcggtaaaagcaatccggccgagcgcacccgcaccc
gcgcctgccccggccgcaccgaaggctgatgaaaccactgagcaggaagaaggcctcttc
cgccggctgggacgcaagatcgctggcttctttagtggcgaggaagaacagaaagtcgag
aatcgcgagcagagccagagccagcgcgaagatcgtcgcaaccagggccgtcaggaccgt
cgcaaatcccgggtagcccgcggtgatgaccagcgtgcaggtggcaaccgcagtggcaac
gaacggcgccagggcggccagcagggccgtggtgacgacaaccgtggccgcggccgcaac
cgcaacgacgaccagaaccgtggcaaccagaatcgccaggcatccgaaaacaaaggccag
gataatcgcggaggcgacaacaagagcgccgacaacaaaggctctgaaaatcgtcgtgac
aaccgtcgcgacaaccagggccgcggccgcaacaggccccagcgcgacccgaaggataat
cgcgagcagaaggaccagaaggatcagggccagcaggataatgcagccaagtccggtcca
gcggacaagaccggttcagaagagaaacgcagaaagccacgtcgccagcgcaaccgcgac
ggctctccgtctgaagcaccggcgtccgctccggctgatcgaaaagccgctcgtagcgag
aagcatcagaaggacacgcagcccgaaaacggtcgtgacgatgccaagcccgaggtgaaa
accgagcaggtaaaggaaaccgtcaacaaagcgtctgacaagcctgaaacaagggccgag
actgcgccggcggccagcgaaacaccgaaaccggaagctgctcagaaagagccagtgaaa
gagcagaagcccgagaaggcatccgcagacaaagcgccgtcggagagcaagccggaagcg
aaaccggcagcggaaacaaaacccgttgcagagagcccggttgaaaagcaggaagctgtt
caagcgaaacctgaaaaagccgagcccgccaaggctgaacaaagctccgaaccccttgag
aagcctgaggaaaagagcgaaaacgttaccgagcaggcgcaaggcgcagccacagacaaa
gagcctgccaagagcaccgcggccactgatgagccaaagccggtgactgaccaggctacc
gagaaaaaagaggcagctccgaggtcaaagccggagtccagggccacggccgacggtgaa
caagcgccgcgggcgaagaagcagccggcgaagcccaaggaagcgccagccgccaaggca
gaaccggaggaggcaccacaacccgagaaggctgaaaagccagcggaggagaaggtagca
ccagagcgtaaggctcccgaggctcaaccggagccaaagcagccggaaccagcccaggcc
agccccgaaaaggccgagcccaagaaagccgagcccgaaaaagttgaggccaaaaccgca
gagccagtgaaggaagagacgccttccgctccggaggcaacagccaaggacacgcctgcc
gatgccccggcagtcgacgttcctgtaacaccgggccgcgcttacaatgatccaagagaa
gtccgcaagcgccagaaggccgcggaagaggccaaaaaggccgggagtaactaa

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