Marinobacter sp. CP1: ACP86_01265
Help
Entry
ACP86_01265 CDS
T04052
Name
(GenBank) ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mari
Marinobacter sp. CP1
Pathway
mari03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mari00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACP86_01265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mari03019
]
ACP86_01265
03009 Ribosome biogenesis [BR:
mari03009
]
ACP86_01265
Enzymes [BR:
mari01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
ACP86_01265
Messenger RNA biogenesis [BR:
mari03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACP86_01265
Ribosome biogenesis [BR:
mari03009
]
Prokaryotic type
rRNA processing factors
ACP86_01265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
AKV94905
UniProt:
A0A0K1U579
LinkDB
All DBs
Position
272168..275401
Genome browser
AA seq
1077 aa
AA seq
DB search
MKRMLINATHPEELRVALVDGQRLFDLDIESSSREQKKANIYKGRITRVEPSLEAAFVDF
GAERHGFLPLKEISKEYFKKSPGQIEGKINIKDVVSEGQEVIVQVDKEERGNKGAALTTF
ISLAGRYLVLMPNNPRAGGISRRIEGDERAQLKEAMNDVQVPKSMGIIVRTAGIGRTTEE
LQWDLDYLVQFWEAITQAAGERKAPFLIHQESNVIIRAVRDYLRQDIGEVLIDANGVYED
VLNFVRAVMPTFENKIKLYKDEIPLFSRYQIEGQIETAFQREVKLPSGGSIVIDPTEALV
SIDINSSRATKGQDIEETALQTNLEAAEEIARQLRLRDMGGLIVIDFIDMTPAKHQREVE
QKMREALEIDRARVQVGKISRFGLLEMSRQRLRPSLGETRSEVCPRCEGQGTIRGIESLA
LSIMRLIYEESSKDKTGEVRAVVPVSVATFLLNEKRKQLADIEARQEVSVVVVPVPHMET
PHFEIIRMRQDETTPEHISSHQVAQEYSEREEEIFEAPTPEKPVREQAAVKAIRPSAPAP
APAPAAPKADETTEQEEGLFRRLGRKIAGFFSGEEEQKVENREQSQSQREDRRNQGRQDR
RKSRVARGDDQRAGGNRSGNERRQGGQQGRGDDNRGRGRNRNDDQNRGNQNRQASENKGQ
DNRGGDNKSADNKGSENRRDNRRDNQGRGRNRPQRDPKDNREQKDQKDQGQQDNAAKSGP
ADKTGSEEKRRKPRRQRNRDGSPSEAPASAPADRKAARSEKHQKDTQPENGRDDAKPEVK
TEQVKETVNKASDKPETRAETAPAASETPKPEAAQKEPVKEQKPEKASADKAPSESKPEA
KPAAETKPVAESPVEKQEAVQAKPEKAEPAKAEQSSEPLEKPEEKSENVTEQAQGAATDK
EPAKSTAATDEPKPVTDQATEKKEAAPRSKPESRATADGEQAPRAKKQPAKPKEAPAAKA
EPEEAPQPEKAEKPAEEKVAPERKAPEAQPEPKQPEPAQASPEKAEPKKAEPEKVEAKTA
EPVKEETPSAPEATAKDTPADAPAVDVPVTPGRAYNDPREVRKRQKAAEEAKKAGSN
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatgcttatcaatgcaactcatcccgaagagttgcgcgtcgccctggttgac
ggccagcgtctattcgaccttgatatcgaatccagctcccgcgagcagaagaaagccaat
atctacaagggccgcattacccgggtcgagcccagtctcgaggccgcatttgtggatttc
ggcgccgagcgacacggctttctgccgttgaaggaaatttccaaggaatacttcaagaag
tcgcccggccagatcgaaggcaaaatcaacatcaaggacgttgtttccgaaggccaggaa
gtcatcgtgcaggtcgataaggaagagcgtggcaataagggcgcagccctgaccacgttt
atctccctggcaggtcgctatctggtactcatgcccaacaacccccgtgctggcggcatc
tcccgtcgcattgagggcgatgagcgggcgcagctcaaagaagcgatgaacgatgttcag
gtgccgaaatccatgggcatcatcgttcgtaccgccggcatcggccgtaccactgaagaa
ctccagtgggatctggactacctggtgcaattctgggaggccatcactcaggccgccggc
gagcgcaaggcccccttcctgattcaccaggaaagcaacgttatcatccgtgcggtccgt
gactaccttcgccaggacatcggcgaggttctgattgacgctaatggcgtctatgaggac
gtcctgaatttcgttcgtgcggtcatgcccaccttcgaaaacaagatcaagctgtacaag
gatgaaatcccgctgttcagccggtaccagatcgaaggccagatcgagaccgccttccag
cgggaagtgaaactgccctccggcggctccatcgtgattgacccgaccgaggccctggtt
tccatcgacatcaactcttcccgcgccacgaaaggccaggatatcgaggaaaccgcgctc
cagaccaacctggaagcggcagaggaaatcgcccgccagctgcgcctgcgtgacatgggc
ggcctgattgtcatcgactttatcgacatgacgcctgcgaagcatcagcgggaagttgaa
cagaagatgcgtgaggccctggaaatcgaccgggcccgggttcaggtgggcaaaatctcc
cgcttcggcctgctggaaatgtcccgtcagcgcctgcgcccttccctgggagagacacgc
agcgaagtgtgcccccgatgtgaaggtcagggcactattcgtggcatcgagtccctcgcc
ctgagcatcatgcgcctgatctacgaggaatcgtcaaaggataagaccggcgaagtacga
gccgttgtgccggtttccgtcgccactttcctgctcaacgagaagcgcaagcagctggcc
gacattgaagcccgccaggaagtgagcgttgtcgtggtgccggttccgcatatggagaca
ccgcatttcgaaatcatccggatgcgccaggatgaaacaacgcccgagcacatttccagc
catcaggtggcccaggagtacagcgagcgtgaagaagaaatcttcgaggcgcccacccct
gagaagccggtacgcgaacaggctgcggtaaaagcaatccggccgagcgcacccgcaccc
gcgcctgccccggccgcaccgaaggctgatgaaaccactgagcaggaagaaggcctcttc
cgccggctgggacgcaagatcgctggcttctttagtggcgaggaagaacagaaagtcgag
aatcgcgagcagagccagagccagcgcgaagatcgtcgcaaccagggccgtcaggaccgt
cgcaaatcccgggtagcccgcggtgatgaccagcgtgcaggtggcaaccgcagtggcaac
gaacggcgccagggcggccagcagggccgtggtgacgacaaccgtggccgcggccgcaac
cgcaacgacgaccagaaccgtggcaaccagaatcgccaggcatccgaaaacaaaggccag
gataatcgcggaggcgacaacaagagcgccgacaacaaaggctctgaaaatcgtcgtgac
aaccgtcgcgacaaccagggccgcggccgcaacaggccccagcgcgacccgaaggataat
cgcgagcagaaggaccagaaggatcagggccagcaggataatgcagccaagtccggtcca
gcggacaagaccggttcagaagagaaacgcagaaagccacgtcgccagcgcaaccgcgac
ggctctccgtctgaagcaccggcgtccgctccggctgatcgaaaagccgctcgtagcgag
aagcatcagaaggacacgcagcccgaaaacggtcgtgacgatgccaagcccgaggtgaaa
accgagcaggtaaaggaaaccgtcaacaaagcgtctgacaagcctgaaacaagggccgag
actgcgccggcggccagcgaaacaccgaaaccggaagctgctcagaaagagccagtgaaa
gagcagaagcccgagaaggcatccgcagacaaagcgccgtcggagagcaagccggaagcg
aaaccggcagcggaaacaaaacccgttgcagagagcccggttgaaaagcaggaagctgtt
caagcgaaacctgaaaaagccgagcccgccaaggctgaacaaagctccgaaccccttgag
aagcctgaggaaaagagcgaaaacgttaccgagcaggcgcaaggcgcagccacagacaaa
gagcctgccaagagcaccgcggccactgatgagccaaagccggtgactgaccaggctacc
gagaaaaaagaggcagctccgaggtcaaagccggagtccagggccacggccgacggtgaa
caagcgccgcgggcgaagaagcagccggcgaagcccaaggaagcgccagccgccaaggca
gaaccggaggaggcaccacaacccgagaaggctgaaaagccagcggaggagaaggtagca
ccagagcgtaaggctcccgaggctcaaccggagccaaagcagccggaaccagcccaggcc
agccccgaaaaggccgagcccaagaaagccgagcccgaaaaagttgaggccaaaaccgca
gagccagtgaaggaagagacgccttccgctccggaggcaacagccaaggacacgcctgcc
gatgccccggcagtcgacgttcctgtaacaccgggccgcgcttacaatgatccaagagaa
gtccgcaagcgccagaaggccgcggaagaggccaaaaaggccgggagtaactaa
DBGET
integrated database retrieval system