Marinilactibacillus sp. 15R: BKP56_01705
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Entry
BKP56_01705 CDS
T04573
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
marr
Marinilactibacillus sp. 15R
Pathway
marr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
marr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BKP56_01705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
marr03021
]
BKP56_01705
03400 DNA repair and recombination proteins [BR:
marr03400
]
BKP56_01705
Enzymes [BR:
marr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BKP56_01705
Transcription machinery [BR:
marr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BKP56_01705
DNA repair and recombination proteins [BR:
marr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BKP56_01705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF961
Motif
Other DBs
NCBI-ProteinID:
API88117
UniProt:
A0A1L4BWA1
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All DBs
Position
complement(372768..373712)
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AA seq
314 aa
AA seq
DB search
MIEIEKPVIETVEISEDGKFGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTNIQIDS
VLHEFTAIDGVVEDVTAIILNLKKLALKLYSDETKTIEIDVEGPATVTAADIIYDSDVEV
MNPDLYICTVSEGGHLHARMEAQKGRGYVRAEYNKHEDMPIGVLPIDSIYTPISRVNYHV
EDTRVGEKNQFDKLTLDVWTDGSISPEDGVSLAAKIMTEHLNIFVNLTEEAREAEIMVEK
EETQMEKMLEMTIEELDLSVRSYNCLKRAGINTVQELTNKTEPEMMKVRNLGRKSLEEVK
YKLGELDLGLREEE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaattgaaaagccggtaatagaaacagttgagatcagtgaggatggaaaattc
ggtaagtttgtcgtagaaccacttgagcgtggctatggtacaacgttggggaactctcta
cgtcgaattcttttatcatctttaccaggtgctgccgtcacaaatattcaaatcgatagt
gttttacatgaattcacagcaatcgatggggtagtagaagatgtgactgccatcatctta
aacttaaagaaacttgcacttaagttgtattctgatgaaacaaaaacgattgagattgat
gttgaaggaccagcaactgtaacagctgctgacattatttatgacagtgatgttgaggta
atgaaccctgacctttatatttgtacagtttctgaaggtgggcatttacatgcacgcatg
gaagcgcaaaaaggcagaggatatgttcgcgccgaatacaacaaacacgaagatatgcca
attggtgtgctcccgattgattcgatttataccccaatcagccgtgtgaattatcatgtg
gaagatactcgtgtaggagagaaaaatcagtttgacaagttaacgcttgacgtttggact
gacggatcaatttctcctgaggatggcgtgagtttagcggcaaaaataatgactgaacac
ttaaacatctttgtaaacttgacagaagaagctcgagaagctgaaatcatggttgaaaaa
gaagaaactcagatggaaaaaatgcttgagatgacaatcgaagagcttgacctatctgta
cgttcttacaactgtctgaagcgcgcggggataaacactgttcaagaattgacaaataaa
actgaaccagaaatgatgaaagttcgtaacttaggacgtaaatcgctggaagaagttaaa
tataaattaggtgagcttgatttaggcttacgtgaagaagaataa
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