KEGG   Maribacter sp. T28: BTR34_12825Help
Entry
BTR34_12825       CDS       T04597                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mart  Maribacter sp. T28
Pathway
mart03030  DNA replication
mart03410  Base excision repair
mart03420  Nucleotide excision repair
mart03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mart00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BTR34_12825
   03410 Base excision repair
    BTR34_12825
   03420 Nucleotide excision repair
    BTR34_12825
   03430 Mismatch repair
    BTR34_12825
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mart03032]
    BTR34_12825
   03400 DNA repair and recombination proteins [BR:mart03400]
    BTR34_12825
Enzymes [BR:mart01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     BTR34_12825
    6.5.1.6  DNA ligase (ATP or NAD+)
     BTR34_12825
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     BTR34_12825
DNA replication proteins [BR:mart03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    BTR34_12825
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     BTR34_12825
DNA repair and recombination proteins [BR:mart03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     BTR34_12825
   NER (nucleotide excision repair)
    Other NER factors
     BTR34_12825
   MMR (mismatch exicision repair)
    Other MMR factors
     BTR34_12825
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID: APQ18152
UniProt: A0A1B7Z1B4
LinkDB All DBs
Position
complement(3001955..3003586)
Genome map
AA seq 543 aa AA seqDB search
MKNFAHLIKKLDSTNKTNLKVQALTDYFLVATDEDKVWTIAILSHRRPPRPVNTTLLRKW
ASELANIPLWLFEESYHIVGDLAETIALIIPSTKSTTHKTLSQFLQEMIDLKKKSEEEKK
NYLFKNWKTLDYYERFVFTKLITGGFRIGVSQKLMTRALSKATTINEDILAYKLMGNWDP
NKISFQELILEENASDYLSKPYPFYLAYAIENNINDLGDVNEWSAEHKWDGIRSQTIIRK
NELFVWSRGEELVTDKYPEFEIFIGTIPNGTVIDGEILPYKNDEIGTFNDLQTRIGRKKI
SKALLEKVPVILKAYDILEWKGEDIRNRPFTERRKILLQLFDDISLINAQRTKNNQLKIP
FQLSKTMHFNSWEEVTLEREQSRDVRSEGLMLKRKDSPYLVGRKKGDWWKWKVDPLTIDA
VLTYAMRGHGRRSNLFTDYTFALWSHNDKGEKELVTFAKAYSGLTDAEFRKVDAWIKKNT
LQRFGPVRSVTPYQVFEIAFEGIALSKRHKSGVATRFPRILRWRQDKTIYEANNLSDLKD
MII
NT seq 1632 nt NT seq  +upstreamnt  +downstreamnt
atgaaaaattttgcacatcttataaaaaaactagacagcaccaacaagacaaatttaaaa
gtacaggcattaacagattactttttagtcgccaccgatgaagataaagtttggaccatt
gccatactttcccataggcgaccaccaagacccgttaataccacgttattacgaaaatgg
gcctcagagttggctaacattcctttatggctttttgaagaaagttatcatatagtgggt
gatttggctgaaaccatagccttaattattccatcaacaaaatcgactacccataaaaca
ctatcccagtttcttcaagaaatgattgatttaaagaagaaatcagaggaagaaaagaaa
aattatctattcaaaaattggaaaacacttgattattatgaacgtttcgtttttacaaaa
ctaattacaggaggttttagaattggtgtaagtcaaaaattaatgaccagggcgttgtct
aaagcaactactataaatgaggatattctggcttataaactcatggggaattgggatcct
aataaaatttcttttcaagaattaattttagaggaaaatgccagtgattacctttctaaa
ccctatcctttttatttagcttatgccattgaaaataatatcaatgacttgggagatgtt
aatgaatggtcagctgaacataagtgggatggtattcgttctcagacaattattagaaaa
aatgaattatttgtatggagtcgtggtgaagaattagttactgacaaatatccagaattc
gaaatttttataggaactatccccaatggaacggtaatagacggagaaattctgccttac
aaaaatgatgaaataggaactttcaacgaccttcaaaccagaattggcagaaaaaaaata
agcaaagctttattggaaaaagtccctgttattttaaaagcttacgatatattggaatgg
aaaggcgaagatatacgcaatcgaccattcactgaacgcagaaaaatattactacaatta
tttgacgacatttcacttattaatgcgcaacgaacaaaaaataatcaacttaaaattccc
tttcagctatctaaaactatgcattttaattcatgggaggaagttactctagaacgggaa
caatcacgagatgttcgcagtgaaggacttatgttaaagcgaaaagattccccctattta
gtaggccgtaaaaaaggagactggtggaaatggaaagttgaccctttaactattgatgcc
gtattaacttacgcaatgcgtggccatggtcgaagaagtaacttattcacagactatact
tttgcactatggagccataacgataaaggtgaaaaagaactggtaacctttgcaaaggcg
tattctggcttgactgatgctgaatttagaaaagtagacgcttggattaagaaaaacaca
ttgcaacggtttggaccagtacgttctgttacgccctaccaagttttcgaaatagccttt
gaaggaattgcgctttcaaaacgacataaaagtggagtagctacacgatttccaagaatt
ttaagatggcggcaagacaaaactatatatgaggcaaacaacctcagcgatttaaaggat
atgataatttaa

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