Palleronia sp. THAF1: FIU81_16620
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Entry
FIU81_16620 CDS
T06247
Symbol
mutM2
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
maru
Palleronia sp. THAF1
Pathway
maru03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
maru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FIU81_16620 (mutM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maru03400
]
FIU81_16620 (mutM2)
Enzymes [BR:
maru01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
FIU81_16620 (mutM2)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FIU81_16620 (mutM2)
DNA repair and recombination proteins [BR:
maru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FIU81_16620 (mutM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
QFU10307
UniProt:
A0A5P9JBV3
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All DBs
Position
3246907..3247758
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AA seq
283 aa
AA seq
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MPELPEVETVRRGLVPAMEGRVIERAEVRRPDLRWPFPDCMAERLGGARIDALGRRSKYL
LLHLDTDETLIVHLGMSGRMQVDEAPTAGFVQDTGGAAKHDHVVFHMAGGARVTFNDPRR
FGAMDLAATDRLDDHWLLAKIGPEPLGNSFDERHLIEAFAGRNTPVKSALLDQGIVAGLG
NIYVCEALHRAGISPRRKAGRIAAPRVAALVPVIRETLRDAIEAGGSSLRDYRQADGAMG
YFQHTFRVYGREGDACVTDGCGGTVRRIVQSGRSTFYCAQCQR
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattgccagaggtggaaaccgtgcggcgcggacttgttcccgcgatggaaggt
cgcgtgatcgagcgtgcagaggtgcgccgacccgatctacgctggccgttcccggactgc
atggccgaacggctgggcggcgcgcggatcgatgcgctgggacggcggtcgaaatatctg
ctgctgcatctggataccgacgagacgctgatcgtgcatctgggcatgtcgggccggatg
caggtggatgaagcgccgaccgccggattcgtgcaagacaccggcggcgcggcgaagcat
gaccacgtggtttttcacatggcaggcggcgcgcgtgtgacgttcaacgacccgcggcga
ttcggggccatggatctggcggcgacggaccggctggacgaccattggctgctggcgaag
atcgggccagagcctttgggcaacagcttcgacgaacgccacttgatcgaggccttcgcg
ggccgcaacacgccggtgaaatcggctttgttggaccagggaatcgtcgccggtctgggc
aatatctatgtgtgcgaagcgctacaccgggcgggtatctctcctcggcgcaaggcgggg
cggatcgccgcgccccgcgtggccgcccttgtgccggtgatccgcgagacgttgcgcgac
gcgatcgaggcgggcggatcgagcttgcgtgactaccgccaagccgatggtgcgatggga
tattttcagcataccttccgggtttatggacgcgaaggtgacgcttgcgtcaccgatggc
tgcggcggcacggtgcggcgaatcgtccagtcgggacgatcaactttctactgtgcgcaa
tgccaaagatag
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