Massilia violaceinigra: CR152_05635
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Entry
CR152_05635 CDS
T05157
Name
(GenBank) endonuclease
KO
K05522
endonuclease VIII [EC:3.2.2.-
4.2.99.18
]
Organism
mass
Massilia violaceinigra
Pathway
mass03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mass00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CR152_05635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mass03400
]
CR152_05635
Enzymes [BR:
mass01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CR152_05635
DNA repair and recombination proteins [BR:
mass03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CR152_05635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
Zn_Tnp_IS1595
DpnI
Motif
Other DBs
NCBI-ProteinID:
ATQ74058
UniProt:
A0A2D2DGD1
LinkDB
All DBs
Position
complement(1238921..1239658)
Genome browser
AA seq
245 aa
AA seq
DB search
MPEGPSLVILREETTRFVGKEIARATGNTKTVDLPSLEGQKIVSLRSWGKHFIIELPHTV
LRIHFMLFGSYRIDERKDKPPRMALEFTDGSELNFYACSVKHIEPDLDASYDWDADIMSP
TWDAAKARKKLRAAPDMLACDALLDQTIFAGVGNIIKNEVLFRIRLHPLSTIGALPAPKL
RALVEQARQYSFDFLEWKKQFVLKQHWLAHRKTICPRCDIPFSKGHLGLTKRRAFYCEKC
QKRYG
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaaggaccatcgctcgtcatcctgcgcgaagaaaccacgcgtttcgtcggcaag
gaaattgcccgtgccactggcaacaccaagactgtcgacctgcccagcctggaggggcag
aaaatcgtctcgctgcgcagttggggcaagcatttcatcatcgaattgccgcacacggtg
ctgcgcattcacttcatgctgttcggcagctaccgcatcgacgagcgcaaggacaagccg
ccgcgcatggcgctcgaatttaccgatggcagcgaactgaatttctacgcctgttccgtc
aagcatatcgaacccgacctcgacgccagctacgactgggacgccgacatcatgtcgccc
acctgggacgcggccaaggcgcgcaagaagctgcgcgccgcgcccgacatgctggcctgc
gatgccctgctcgaccagaccatcttcgccggcgtgggcaatatcatcaagaacgaagtg
ctgttccgcatccgcctgcatccgctctcgaccatcggcgcgctgccggcgcccaagctg
cgcgccctggtggagcaggcacgtcaatacagtttcgatttcctcgaatggaaaaagcag
ttcgtgctcaaacagcattggctggcgcaccgcaagaccatctgtccgcgctgcgatatt
cccttttcaaaaggacatctgggactcaccaaacggcgcgcattttattgcgagaaatgc
caaaaacgctacggctaa
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