Massilia violaceinigra: CR152_30765
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Entry
CR152_30765 CDS
T05157
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
mass
Massilia violaceinigra
Brite
KEGG Orthology (KO) [BR:
mass00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mass03019
]
CR152_30765
03009 Ribosome biogenesis [BR:
mass03009
]
CR152_30765
Messenger RNA biogenesis [BR:
mass03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CR152_30765
Ribosome biogenesis [BR:
mass03009
]
Eukaryotic type
Pre-60S particles
RNases
CR152_30765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
CTD1
pP_pnuc_1
Motif
Other DBs
NCBI-ProteinID:
ATQ78407
UniProt:
A0A2D2DTV5
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All DBs
Position
complement(7153635..7154219)
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AA seq
194 aa
AA seq
DB search
MSHATDLAAPAALPRPNEFNLVWVDMEMTGLEPDTDRIIEVAVVVTDMHLNILGEGPVFA
IHQSDETLDKMDAWNKGTHGRSGLIEKVKASTVTEAEAEAQLIAWLKNYVPAGKSPMCGN
TICQDRRFMVRGMPKLEAFFHYRNLDVSTLKELCKRWKPEIVSGFKKHQKHTALADIIES
IEELRYYREHFIKL
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatgccactgatttagcagcaccggccgcgttaccgcgcccaaatgagttcaac
ctggtttgggtggacatggaaatgacgggcctggagcccgataccgaccgtatcatcgaa
gtggcggtcgtcgtgaccgacatgcacctgaacatcctgggcgaaggcccggtgttcgcc
atccaccagtcggacgaaacgctcgacaagatggatgcctggaacaagggtacccacggg
cgctccgggctgatcgagaaggtcaaggcctcgaccgtgaccgaagccgaagccgaagcg
caactgatcgcctggctgaagaactacgttcctgccggtaagtcgcccatgtgcggcaat
accatttgccaggaccgccgcttcatggtgcgcggcatgccgaagctggaagcgttcttc
cactaccgcaacctggatgtgtcgaccctgaaagagctgtgcaagcgctggaagccggaa
atcgtcagcggtttcaagaagcaccagaagcacacggcgctggccgacatcatcgaatcg
atcgaagagctgcgctactaccgcgagcatttcatcaagctgtaa
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