Massilia sp. YMA4: DPH57_03360
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Entry
DPH57_03360 CDS
T05528
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
masy
Massilia sp. YMA4
Pathway
masy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
masy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DPH57_03360 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
masy03400
]
DPH57_03360 (uvrA)
DNA repair and recombination proteins [BR:
masy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DPH57_03360 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DPH57_03360 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
nSTAND1
AAA_16
AAA_21
AAA_29
DnaJ_CXXCXGXG
AAA_25
AAA_33
MeaB
Motif
Other DBs
NCBI-ProteinID:
AXA90290
UniProt:
A0A7U6B2M3
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All DBs
Position
747984..750512
Genome browser
AA seq
842 aa
AA seq
DB search
MKGRQLPGMVRVRGAREHNLKNVDLDIPRDALVVFTGVSGSGKSSLAFGTLYAEAQRRYL
ESVSPYARRLFHQMPVPQVDEIDGLPPAVALQQQRGSPTTRSSVGSVTTLSNSLRMLYSR
AGDYPSGQELLYAESFSPNTPEGACPECHGLGRVYEVTERSMVPDDSLTIRERAVAAWPP
AWHGQNLRDILVTLGYDVDTPWRDLPKKDRDWILYTEETPTVPVYAGLTPQETRQALRRK
DPPSYQGTFTGARKYVLQTFANTESASMKKRVARYMVSNECPVCRGKRLRAESLSVTFAG
HDITDISRLPLARLAQTMRPYADGSAKVSAKERAAHPEKLIVTQRIAQDVLARLDVLLDL
GLGYLTLDRSTPTLSPGELQRLRLATQVRSNLFGVVYVLDEPSAGLHPADTVALLRAMDR
LKASGNSLFVVEHALDVIRHADWIVDVGPAAGEGGGAVLYSGAPDGLRDVAASQTRRYLF
PDAAPPARTVREPAGWLKLAGITRNNLRGLDAAFPLGVLTTVTGVSGSGKSSLVSQVLVE
LVGRALGHEVAAEPEEGDELDRPAELPLEGRIVAGLEQVRRMVRVDQKPIGRTPRSNLAT
YTGLFDHVRKLFAATKTAKARRYDAGRFSFNVAKGRCDNCEGEGFVMVELLFLPSVYAPC
PVCAGARYNAKTLEVTYRERNIAEVLGMTVDAAWEFFADEPALHRALDVLREVGLGYLRL
GQPATELSGGEAQRIKLATELQRASRGDTLYVLDEPTTGLHPADVERLIVQLQKLVDAGN
TVVAVEHDMRVVAASDWVVDIGPGAGEEGGTVVAAGPPAQVARSKASRTAPYLRRFLGGP
AA
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgaagggccgccagttgcccggcatggtcagggtgcgcggcgcgcgcgaacacaacctg
aaaaacgtcgacctggacatcccgcgcgatgcgttggtggtcttcaccggcgtatccggc
tccggcaagtcgtcgctggcgttcggcacgctgtatgcggaggcgcagcggcgctacctg
gaatcggtatcgccctatgcgcgccgcttgttccaccagatgccggtgccgcaggtggac
gagatcgacggcctgccgcccgccgtggcgctgcagcagcagcgcggttcgcccaccacg
cgctcgtcggtgggcagtgtgaccaccttgtcgaactcgctgcgcatgctgtactcgcgc
gccggcgactacccaagcggccaggagctgctgtatgccgaatcgttctcgccgaatacc
ccggaaggcgcctgccccgaatgccatggcctgggccgggtgtacgaggtcacggagcgc
tcgatggtgccggacgactcgctgacgatccgcgaacgcgccgtcgcggcctggccgccg
gcctggcatggccagaacctgcgcgacatcctggtcaccctgggctacgacgtcgacacg
ccatggcgcgacctgccgaagaaggaccgcgactggatcctgtacacggaagagacgccg
acggtgccggtctacgccggcttgacgccgcaggaaaccaggcaggccttgcggcgcaag
gacccgcccagctaccagggcacgtttaccggcgcgcgcaagtacgtgctgcagacgttt
gccaacacggaaagcgcgtccatgaagaagcgcgtggcgcgctacatggtcagcaacgag
tgcccggtctgccgcggcaagcggctgcgcgccgagtcgctttcggtcaccttcgccggc
cacgacatcaccgatatttcgcgcctgccgctggcgcgcctggcgcagacgatgcgcccg
tatgcggacggcagcgcgaaagtcagcgccaaggagcgcgcggcgcatccggaaaagctg
atcgtcacgcagcgcatcgcccaggacgtgctggcccggctggacgtgctgctcgacctg
ggcctgggctacctgacgctggaccgcagcacgccgaccttgtcgccgggcgaattgcag
cgcctgcgcctggccacccaggtgcgttcgaacctgttcggcgtggtctacgtgctggac
gagccgtcggccggcctgcatccggccgacacggtggcgctgctgcgggcgatggaccgg
ctgaaggcatcgggcaactcgctgttcgtcgtcgagcacgcactggacgtgatccgccat
gccgactggatcgtggacgtgggcccggcggcgggcgagggcggcggcgcggtactgtac
agcggcgcgccggacggcctgcgcgacgtggcggcctcccagacgcggcgctatctgttt
ccggatgcggccccgccggcgcgcacggtgcgagagccggccggctggctgaagctggcc
ggcatcacgcgcaacaacctgcgcgggctggacgcggcctttcccttgggggtgctgacg
acggtgacgggcgtgtccggctccggcaaatccagcctggtcagccaggtgctggtggag
ctggtcggccgcgcactggggcatgaggtggcggccgaaccggaggaaggcgatgagctg
gaccggcccgccgagctgccgctggagggccgcatcgtggcgggactggagcaggtgcgg
cgcatggtgcgggtggaccagaagccgatcggccgcacgccgcgctcgaacctggccacc
tacaccggcctgttcgaccacgtgcgcaagctgttcgcggccacgaaaacggcgaaggca
cgccgctacgatgccggccgcttctcgttcaatgtcgccaaggggcgctgcgacaactgc
gagggcgagggcttcgtcatggtggagctgctgttcctgcccagcgtctacgcgccgtgc
ccggtctgcgccggcgcgcgctacaacgccaagacgctggaggtgacgtaccgcgagcgc
aatatcgccgaggtgctgggcatgacggtggacgcggcctgggaattcttcgccgacgaa
ccggcgctgcaccgcgcactggacgtgctgcgcgaggtagggctgggctacctgcgcctg
ggccagccggccacggaactctccggtggcgaggcgcagcgcatcaagctggccaccgaa
ttgcagcgcgcctcgcgcggcgacaccttgtatgtgctggacgaaccgaccacgggcctg
cacccggcggacgtcgaacgcctcatcgtccagctgcaaaagctggtcgatgccggcaac
acggtggtggccgtcgaacacgatatgcgcgtggtcgcggcgagcgactgggtcgtcgac
atcggcccgggcgcgggcgaggagggcggcacggtggtggcggccggcccgccggcgcag
gtggcgcgcagcaaggcgagccgcaccgcgccgtatctgcggcgcttcctgggcggcccg
gcagcgtga
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