Massilia sp. YMA4: DPH57_11330
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Entry
DPH57_11330 CDS
T05528
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
masy
Massilia sp. YMA4
Pathway
masy03030
DNA replication
masy03430
Mismatch repair
masy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
masy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DPH57_11330
03430 Mismatch repair
DPH57_11330
03440 Homologous recombination
DPH57_11330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
masy03032
]
DPH57_11330
03400 DNA repair and recombination proteins [BR:
masy03400
]
DPH57_11330
Enzymes [BR:
masy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DPH57_11330
DNA replication proteins [BR:
masy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DPH57_11330
DNA repair and recombination proteins [BR:
masy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DPH57_11330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
RuvB_N
AAA_16
AAA_22
AAA_14
AAA_18
AAA_30
DNA_pol3_tau_5
AAA_2
AAA_24
PIF1
Glyco_tranf_2_5
AAA_assoc_2
TsaE
Mg_chelatase
nSTAND3
AAA_19
AAA_28
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
AXA91689
UniProt:
A0A7U5XYF1
LinkDB
All DBs
Position
complement(2657771..2660032)
Genome browser
AA seq
753 aa
AA seq
DB search
MSYQVLARKYRPRNFETLVGQEHVVRALTHALGTGRLHHAYLFTGTRGVGKTTLSRILAK
SLNCTGPDGTGGITATPCGVCEACTAIDGGRFVDYIEMDAASNRGVDEMAQLLEQAVYAP
SNARFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNL
KQMPPGHIVGHLENILGQENVTFEQPALRLLAQGAHGSMRDALSLTDQAIAYAAGAVTLE
AVQGMLGALDQSYLIRLLDALAERDGADLLAVADEMASRSLSYNGALQDLGTLLHRIALA
QTVPAAVPEDLPEYADIVRLAGRFDAEEVQLYYQIAVHGRNELGLAPDEYAGFSMTLLRM
LAFRPGVGGAEGAPGAAPVAARPAGPNPARAAAAAAGGQAVAAVPARPAPPPVAAMPAAQ
APVAAPPQVAAPVPARVQPTAQPPAAPARPGGGPVSPARAAINAALEAARAATAARTGAR
PPARPADDSSAAAPAAVAAPLPPQAGGSAPQGAQARQAPGRPAPWEDDPAGLTMGAAAVL
EAPPPVQHAQAQPRQAPAPAPARQAAEEDDLPPWVTEFSDDSAVPAARAEPAPVPAPAAP
ARQAAPAQAPYAYVITPVPELDWDGNWPLLAAHLPLRGVAQQLATQAELIDCTIDGNAAL
FRLRCPIDTWRTPPNVEKLTAALAERFDRPVRVETELGPVWYTTTAEQQVHREACQRKAE
EAVHGDPFVQSMVREFGAFVVPGSIVAPVTPAH
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcaagtcctcgcccgcaaataccgtccccggaacttcgaaacgctggttggc
caggagcacgttgtccgtgccctgacgcacgcgctcggtaccggccggttgcaccacgcc
tatctgttcaccggcacgcgcggggtgggcaagaccacgctgtcgcgtatcctggccaag
tcgctcaactgcaccgggccggacggcaccggcggcatcacggccacgccgtgcggcgtg
tgcgaggcgtgtaccgccatcgacggcggccgcttcgtcgactatatagagatggacgcg
gcgtccaaccgcggcgtcgacgaaatggcgcagctgctggagcaggccgtgtacgcgccg
tccaatgcgcgcttcaaggtctatatgatcgacgaggtgcacatgctgaccaaccacgcc
ttcaacgcgatgctgaagacgctggaggagccgcccgagcacgtcaagttcatcctggcc
acgacggacccgcagaagattcccgtcaccgtgctgtcgcgctgcctgcagttcaacctg
aagcagatgccgccggggcacatcgtcggccacctggagaacatcctgggccaggaaaac
gtcaccttcgagcagcctgccctgcgcctgctggcgcagggcgcgcacggctcgatgcgc
gacgcgctgtcgctgaccgaccaggccatcgcctacgccgccggcgccgtcaccctggaa
gcggtgcagggcatgctgggtgcgctggaccagtcctacctgatccgcctgctcgacgcg
ctggccgagcgcgacggcgccgacctgctggccgtggccgacgagatggcaagccgctcg
ctgtcgtacaacggcgcgctgcaggacctgggcaccttgctgcaccggatcgcgctggcc
cagacggtgcctgccgccgtgccggaagacctgccggaatatgccgacatcgtccgcctg
gccggccggttcgacgcggaagaagtgcagctgtattaccagatcgctgtccatggccgc
aacgaactgggcctggcgccggacgaatacgcgggcttctcgatgacgctgctgcgcatg
ctggcctttcgccccggcgtcggcggggccgagggagcgcccggcgccgccccggtagcg
gcgcggccggccggcccgaatcccgcccgcgccgccgcggcggccgccggcggccaggcg
gtagcggccgtaccggcccgtccggcgccaccgcctgttgccgccatgccggccgcgcag
gcaccggtggcagcgccgccgcaagtcgcggcgccagtaccggcccgggtacagcccacg
gcgcagccgccggccgcgccggcgcggcccggtggcggtcccgtgagcccggcccgcgcc
gccatcaacgcggcgctggaggcggcccgcgccgccacggccgcacgcacgggtgcacgt
ccgccggcgcgcccggctgacgacagcagcgccgccgccccggccgccgtggccgcaccg
ctgccgccgcaggcaggcggcagcgcgccgcagggcgcccaggccaggcaagctcccggc
cgtcccgctccctgggaggacgatcccgccggcctgacgatgggcgcagcggccgtgctg
gaagcgccgccgcccgtgcagcacgcccaggcgcaaccgcgccaggcgccagcaccggcg
ccggcccgccaggcggccgaggaagacgacctgccgccctgggtcaccgagttttccgac
gacagcgccgtgccggcggcccgcgccgaaccggcgcccgtgccggcccccgccgcgccg
gcacgccaggccgcacccgcgcaggctccgtatgcgtacgtcatcaccccggtgccggaa
ctggactgggacggcaactggccgctgctggccgcccacctgccgctgcgcggcgtggcc
cagcagctggcgacgcaggccgaactgatcgactgcaccatcgacggcaacgccgcgctg
ttccgcctgcgctgcccgatcgacacatggcgcacgccgcccaatgtggaaaaactgacg
gccgcgctggccgagcgcttcgaccgccccgtgcgtgtcgagacggagctgggaccggtc
tggtatacgacgacggcggagcagcaggtgcaccgcgaggcctgccagcgcaaggcggaa
gaggctgtgcacggcgatccgttcgtgcaaagcatggtgcgcgagttcggcgcgttcgtc
gtgcccggctcgatcgtggcacccgtgaccccggcccattaa
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