KEGG   Pseudoduganella armeniaca: C9I28_14800
Entry
C9I28_14800       CDS       T05378                                 
Symbol
clpV
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
masz  Pseudoduganella armeniaca
Pathway
masz03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:masz00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    C9I28_14800 (clpV)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:masz02044]
    C9I28_14800 (clpV)
Secretion system [BR:masz02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   C9I28_14800 (clpV)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small AAA_16 AAA_22 Clp_N nSTAND3 AAA_7 AAA_25 Sigma54_activat ResIII NACHT AAA_29 TniB Zeta_toxin SLFN-g3_helicase AAA_23 T2SSE DUF815 SRP54 DUF5947 AAA_30
Other DBs
NCBI-ProteinID: AVR96800
UniProt: A0A2R4CBC7
LinkDB
Position
3396148..3398805
AA seq 885 aa
MSINLKTLIGKLNETSRTAATRAASICVSLGHYEVDIEHLFLALLEQQNSDFVILARQNG
VSVSMLEADLQSEVARFKNGNSRTPVFSERMPKLFEHAWLIASLDLRAGQQALIRSGHLL
QALLTEPELAQLAARSSKLFAKFDLEQIKHNLDKVTAGSVEAVAIPAAGEAAEEGGDPVG
ELQQKAVSKTPALDQFTTNLTQRARDGKVDPVIGRDLEIRQAIDILMRRRQNNPILTGEA
GVGKTAVVEGLALRIAQGDVPEVLRGVEIHTLDMGLLQAGASVKGEFENRLKNVIDEVKK
SPHAIILFIDEAHTMIGAGGQAGQNDAANLLKPALARGELRTIAATTWGEYKKYFEKDAA
LARRFQVVKVEEPSEELACAMLRGMAPLMEKHFNVRVYDEAITEAVRLSHRYISGRQLPD
KAISVLDTACAKVALGQNATPALIENLARKLERMDAEAASLQREQAGGGSAHAARLKELD
AARKAAQEEHTALAARWEKEKELTEKIKAARVVLEGGGEVDPSVRKDVDALQAELRALQG
ETPMVPVQVDGHVVAEIVAGWTGIPLGKMVKDEIKTVLNLKDLLQQRVLGQSHAIEAVAQ
RVRTSRANLDDPNKPKGVFLFVGPSGVGKTETALALADVLYGGERKLVTINMSEYQEAHS
VSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVMELFFQVFDKGVMDDA
EGREIDFKNTIIILTSNIGSSQLMQACLNKPAEELPAPEALEELVRPVLMKQFKPAFLGR
LKVIPYYPISDDVLVKIIELKLNKIKQRIAVNHKAEFSYDEALVEAVLARCTEVDSGARN
VDNILNGTLLPEVAESVLAKMAEGAAIAKIKVSAGKNGQFKYTVK
NT seq 2658 nt   +upstreamnt  +downstreamnt
atgagcatcaacctgaaaacgctgatcggaaaactgaacgagacgagccgcacggcggcc
acccgcgccgccagcatctgcgtctcgctgggccactacgaagtcgatatcgagcacctg
ttcctggccctcctggagcagcagaacagcgacttcgtcatcctggcgcgccagaacggc
gtcagcgtcagcatgctggaggcggacctgcaatcggaagtggcgcgcttcaagaacggc
aattcgcgcacgccggtgttctccgagcgcatgccgaagctgttcgagcacgcctggctg
atcgcctcgctcgacctgcgcgccggccagcaggcgctgatccgcagcggccacctgctg
caggcgctgctgaccgagccggaactggcgcaactggccgcgcgcagctccaagctgttc
gccaagttcgacctggaacagatcaagcacaacctggataaggtcacggcgggctccgtc
gaagcagtcgctatcccggccgcgggcgaggcggcggaagagggcggcgatccggtcggc
gagctgcagcagaaggccgtcagcaagaccccggcgctggaccagttcaccaccaacctg
acgcagcgcgcgcgcgacggcaaggtcgatccggtgatcggccgcgacctggagatccgc
caggccatcgacatcctgatgcgccggcgccagaacaacccgatcctgaccggcgaagcc
ggcgtcggcaagacggccgtggtagaaggcctggccctgcgcatcgcccagggcgacgtg
ccggaagtgctgcgcggcgtcgagatccacacgctggacatgggcctgctgcaggccggc
gccagcgtcaagggcgagttcgagaaccgcctgaagaacgtcatcgacgaagtcaagaaa
agcccgcacgccatcatcctgttcatcgacgaggcgcacaccatgatcggcgccggcggc
caggccggccagaacgacgcggccaacctgctgaaaccggcgctggcgcgcggcgagctg
cgcacgatcgccgccaccacctggggcgaatacaagaagtacttcgagaaggacgccgcg
ctggcgcgccgcttccaggtcgtcaaggtggaagaaccaagcgaggaactggcctgcgcc
atgctgcgcgggatggcgccattgatggagaagcacttcaacgtgcgcgtctacgacgag
gcgatcacggaagccgtgcgcctgtcgcaccgctacatctccggccgccagctgccggac
aaggcgatcagcgtgctcgacacggcctgcgccaaggtggcactgggccagaacgccacg
ccggccctgatcgagaacctggcccgcaagctggagcggatggatgccgaggcggcgtcg
ctgcagcgcgagcaggccggcggcggcagcgcccacgcggcgcgcctgaaggagctggac
gcggcgcgtaaggcggcgcaggaagagcacacggcactggccgcgcgctgggagaaggaa
aaggagctcaccgagaagatcaaggcggcccgcgtcgtgctggaaggcggcggtgaagtt
gatccaagcgtgcgtaaggacgtcgacgcgctgcaggccgagctgcgcgcgctgcagggc
gagacgccgatggtgccggtgcaggtggacggccacgtggtcgccgagatcgtcgccggc
tggaccggcatcccgctgggcaagatggtcaaggacgagatcaagacggtgctgaacctg
aaggacctgctgcagcagcgcgtgctgggccagtcgcacgccatcgaggcggtggcgcag
cgcgtgcgcacgtcgcgcgccaacctggacgatccgaacaagccgaagggcgtgttcctg
ttcgtcggcccgtccggcgtcggcaagaccgagacggcgctcgcgctggcggacgtactg
tacggcggcgaacgcaagctggtcaccatcaacatgagcgaataccaggaagcgcacagc
gtgtcgggcctgaagggctcgccgccgggctacgtcggctacggcgaaggcggcgtgctg
acggaggcggtgcgccgcaatccctacagcgtggtgctgctggacgaagtggagaaagcc
cacccggatgtgatggagctgttcttccaggtgttcgataaaggtgtgatggacgatgcg
gaagggcgcgagatcgacttcaaaaacaccatcatcatcctgacgtcgaacatcggctcg
tcgcagctgatgcaggcctgcctgaacaagccggccgaagagctgccggcgccggaagcg
ctggaagagctggtgcgcccggtgctgatgaagcagttcaagccggcgttcctgggccgc
ctgaaggtgatcccgtactacccgatcagcgacgacgtgctggtcaagatcatcgagctg
aagctgaacaagatcaagcagcgcatcgccgtcaaccacaaggccgaattcagctacgac
gaggcgctggtggaagcggtgctggcgcgctgcaccgaggtcgactcgggcgcccgcaac
gtcgacaacatcctcaacggcaccctgctgccggaggtggcggagtcggtgctggcgaag
atggcggaaggtgcggcgatcgcgaagatcaaggtttcggctggcaagaatgggcagttc
aagtacacggtgaagtag

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