Mycobacterium avium subsp. paratuberculosis E1: RC58_00025
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Entry
RC58_00025 CDS
T03787
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
mavi
Mycobacterium avium subsp. paratuberculosis E1
Brite
KEGG Orthology (KO) [BR:
mavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mavi03032
]
RC58_00025
03400 DNA repair and recombination proteins [BR:
mavi03400
]
RC58_00025
Enzymes [BR:
mavi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RC58_00025
DNA replication proteins [BR:
mavi03032
]
Prokaryotic type
DNA Topoisomerases
RC58_00025
DNA repair and recombination proteins [BR:
mavi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RC58_00025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
AJK73590
UniProt:
A0A7L5MDH8
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All DBs
Position
5258..7291
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AA seq
677 aa
AA seq
DB search
MAAQKKKAQDEYGASAITVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNSVDEAMAG
YADRVDVRILDDGSVEVADNGRGIPVAMHATGAPTVDVVMTQLHAGGKFGGENSGYNVSG
GLHGVGVSVVNALSTRLEVNIARDGYEWSQYYDHAVPGTLKQGEATKRTGTTIRFWADPD
IFETTEYDFETVARRLQEMAFLNKGLTINLTDERVTNEEVVDEVVSDTADAPKSAQEKAA
ESAAPHKVKHRTFHYPGGLVDFVKHINRTKNPIHQSIIDFGGKGPGHEVEIAMQWNGGYS
ESVHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDKKLLKDKDPNLTGDDIREGLAAVI
SVKVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPADAKVIVNKAVSSAQARI
AARKARELVRRKSATDLGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAI
LPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDITKLRYHKIVLMADADVDGQ
HISTLLLTLLFRFMRPLIEHGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAG
KKINKDDGIQRYKGLGEMDAKELWETTMDPTVRVLRQVTLDDAAAADELFSILMGEDVDA
RRSFITRNAKDVRFLDV
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
gtggctgcccagaagaagaaggcgcaagacgaatacggtgcttcagcgatcaccgtcctg
gaaggactggaggcggtccgcaaacgccccggcatgtacatcggctctaccggcgagcga
ggtctgcaccacctcatctgggaggtggtcgacaactcggtcgacgaagcgatggccggc
tacgccgaccgggtcgacgtgcggatcctggacgacggcagcgttgaggtcgccgacaac
ggccgcggcatccccgtcgcgatgcacgcgaccggcgcccccaccgtcgacgtggtgatg
acgcagctgcacgccggcggcaagttcggcggcgaaaacagcggctacaacgtcagcggc
ggtctgcacggcgtcggcgtctcggtggtcaacgcactgtccacccggctcgaggtcaac
atcgcccgcgacggctacgagtggtcgcagtactacgaccacgccgtgcccggcaccctc
aaacagggcgaggccaccaagcgcaccggcaccaccatccggttctgggccgaccccgac
atcttcgagaccaccgagtacgacttcgaaacggtggcccgacggctgcaggaaatggcg
ttcctcaacaagggcctgaccatcaacctcaccgacgagcgggtgaccaacgaagaggtc
gtcgacgaggtggtcagcgacaccgccgacgcacccaagtcggcgcaggagaaggcggcg
gaatcggctgcgccgcataaggtcaagcaccgcaccttccactaccccggcggcctggtc
gacttcgtcaaacacatcaatcgcaccaaaaaccccatccaccagagcatcatcgatttc
ggtgggaagggccccggccacgaggtcgagatcgcgatgcagtggaacggcggctattcc
gaatcggtgcacacgttcgccaacaccatcaacacgcacgagggcggcacccacgaggag
ggcttccgcagcgcgttgacctccgtggtcaacaagtacgccaaggacaagaagctgctc
aaggacaaggaccccaacctcaccggcgacgacatccgcgagggtttggccgcggtgatc
tcggtcaaggtgagcgaaccgcagttcgagggccagaccaagaccaaactgggcaacacc
gaggtgaagtcgttcgtgcagaaggtgtgcaacgaacagctcacccactggttcgaagcc
aaccccgcagacgccaaagtcattgtcaacaaggcggtttcgtcagcgcaggcgcgcatt
gccgcgcgcaaggcgcgagagttggtgcgccgcaagagcgcaaccgacctgggcgggctg
cccggcaagctcgccgactgccggtcgaccgatccgcgcaagtcggaattgtatgtggtc
gagggtgactcggccggcggctcggcgaaaagcggccgggactcgatgttccaggccatc
cttccgctgcgcggcaagatcatcaacgtcgaaaaggcccgcatcgaccgggttttgaag
aacaccgaagtgcaggcgatcatcaccgcgctgggcaccgggattcacgacgagttcgac
atcaccaagctgcgctaccacaagatcgtgttgatggccgacgccgacgtggacggccag
cacatctcgacgctgttgttgacgctgctgttccggttcatgcggccgctgatcgaacac
gggcacgtgttcttggcccagccaccgctgtacaagctgaaatggcagcgcagcgatcca
gagttcgcctactccgaccgcgagcgggacgggctgctcgaggccggcctgaaggccggc
aagaagatcaacaaggacgacggtatccagcgctacaagggtctgggcgagatggacgcc
aaggaattgtgggaaaccacaatggatcccaccgtgcgggtgctgcgccaggtcacgctg
gacgacgccgcggccgccgacgagctgttctccatcctgatgggcgaggacgtcgacgcg
cgccgcagcttcatcacccgcaatgccaaagacgttcgcttcctagacgtttaa
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