Methanomethylophilus alvi: MMALV_11230
Help
Entry
MMALV_11230 CDS
T02624
Name
(GenBank) Cold-shock DEAD-box protein A
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
3.6.4.13
]
Organism
max
Methanomethylophilus alvi
Pathway
max03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
max00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MMALV_11230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
max03019
]
MMALV_11230
03009 Ribosome biogenesis [BR:
max03009
]
MMALV_11230
Messenger RNA biogenesis [BR:
max03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MMALV_11230
Ribosome biogenesis [BR:
max03009
]
Prokaryotic type
rRNA helicases
MMALV_11230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Motif
Other DBs
NCBI-ProteinID:
AGI85856
UniProt:
M9SC40
LinkDB
All DBs
Position
complement(1109095..1110915)
Genome browser
AA seq
606 aa
AA seq
DB search
MTEGKFEDLGISEDVLRAVRSIGWTEPTPVQIAAIPVGLEGADLLAQAQTGTGKTGTYGS
IILSKTMSGGTDPSALVLVPTRELATQVCDQIDALSQFSGHKCFPVYGGVNIENQVKQLK
KGADILVATPGRLKDLLERKEISLSSISIVVLDEADRMLDMGFAPSVNMILSKVPKKRQT
MMFSATMEDDIKKLAVKHMINHRELLISKDEPTLDLTAQYFIMTTRESKRDELVHIIEDG
YPKMIVFCKTKRKVDYLFRKMKRDEYSVCEIHGDMVQNKREKTLRSFVDGDVEVLIASDV
AARGLDIIDVDVVVNYDVPADVESYIHRIGRTGRAGKNGRAITFVTEDDIKMLNAIEKKV
GRRIVEIAPTSSQYSEGPKPDETPKARAKQIKQKQAAKKVAAETALKAETVKKEPKQVPV
KKKFQEEVPAETSGRTLKGRLDRRNRTKAEIEDGAVAPKKAKPAVSKKQPAQAPAKTPKT
QEPKREGQPSNGQRTQYPKPQGIPEHPKPLHSYVKIDKALPPEKDMSFDRIEISIGSDDG
VDQQKLVKFVTKTSGIRTQDIGNIHIYENKSRVQVVRWRSQEVVDELFGQTYNGRRVMVY
NLSDKQ
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaggcaagtttgaggatctaggcatctcggaagacgttctgagggccgtcagg
tccatagggtggacggaacccaccccggtccagattgccgccatcccggtaggcctagag
ggggcggacctcctcgcgcaggcacagaccgggaccggaaagaccggtacatacggttcc
atcatcctgagtaaaaccatgtcgggcggtacagacccctcggcgttggttctcgtgcct
actagggagcttgcaacacaagtgtgcgaccagatcgacgctttgtcgcagttcagcggc
cataaatgtttccccgtatacggcggagtcaacatagagaaccaagtcaaacaacttaaa
aaaggggcggacatcctcgtcgcgaccccaggcaggctcaaagacctattggagaggaag
gagatctctctctcctcgatatccatagtagtcctcgacgaggcggaccgcatgctggac
atgggattcgcacccagcgtgaacatgatcctttccaaggtcccgaagaagaggcagacc
atgatgttctccgccaccatggaggacgacatcaagaagctcgctgtgaaacacatgatc
aatcacagggagctgctcatatccaaggacgaaccgaccctcgacctgaccgcgcagtac
ttcataatgaccactcgcgagtcgaagagggatgaactcgtccacatcatcgaggacgga
tatcccaagatgatcgtgttctgcaagaccaagaggaaggtcgactacctgttccgtaag
atgaagagggacgagtacagcgtctgcgagatccatggggacatggtgcagaacaagagg
gagaagaccctccgctcgttcgttgacggtgatgtggaggtcctcatcgcatccgatgtg
gccgccagaggcctggacatcatcgatgtggatgtggtcgtcaactacgatgtaccggcc
gatgtggaatcgtatatccataggataggaaggaccggaagggccggaaagaacggaagg
gccatcactttcgtcaccgaagacgatatcaagatgctcaacgcgatcgagaagaaggtc
ggcaggaggatcgtcgagatcgctcccacctcctctcaatacagcgaagggccgaagccc
gacgagactcccaaggcccgggcgaagcagatcaaacagaagcaggcggccaagaaggtc
gcggccgagaccgcactcaaggcggagaccgtgaaaaaggagcctaagcaggtccctgtg
aagaagaagttccaggaagaggttccggcggagacctccggacgtaccctcaagggcaga
ttggacagaaggaaccgcacgaaggccgagatcgaggacggggccgtagcacccaagaag
gccaaacccgccgtctccaagaagcagccggcccaggctccggcgaagacacccaagacc
caggagcccaagagggaggggcagccctccaacggccagaggacccagtatcccaagcct
cagggcataccggagcatccgaagcctctgcactcgtatgtcaagatcgacaaggcactc
cctccggagaaggatatgtccttcgacaggatcgagataagcatcggatcagacgatggg
gtcgatcagcagaaactggtcaaattcgtcaccaagacatccggcatccgtactcaggac
atcgggaacatacacatctatgagaacaagtccagagtacaggtcgtcaggtggaggtcc
caggaggtcgtggacgaacttttcggccagacctacaacggcagacgcgtgatggtctac
aacctcagcgacaaacagtga
DBGET
integrated database retrieval system
