KEGG   Candidatus Methanomethylophilus alvus: MMALV_11800Help
Entry
MMALV_11800       CDS       T02624                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
max  Candidatus Methanomethylophilus alvus
Pathway
max03030  DNA replication
max03410  Base excision repair
max03420  Nucleotide excision repair
max03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:max00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MMALV_11800
   03410 Base excision repair
    MMALV_11800
   03420 Nucleotide excision repair
    MMALV_11800
   03430 Mismatch repair
    MMALV_11800
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:max03032]
    MMALV_11800
   03400 DNA repair and recombination proteins [BR:max03400]
    MMALV_11800
Enzymes [BR:max01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     MMALV_11800
    6.5.1.6  DNA ligase (ATP or NAD+)
     MMALV_11800
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     MMALV_11800
DNA replication proteins [BR:max03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    MMALV_11800
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     MMALV_11800
DNA repair and recombination proteins [BR:max03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MMALV_11800
   NER (nucleotide excision repair)
    Other NER factors
     MMALV_11800
   MMR (mismatch excision repair)
    Other MMR factors
     MMALV_11800
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Motif
Other DBs
NCBI-ProteinID: AGI85913
UniProt: M9SIL1
LinkDB All DBs
Position
1170967..1172757
Genome map
AA seq 596 aa AA seqDB search
MQFGDLAEVFDRLEKTSSRLEMTDILAEFFRNVKPEEIRKTIYLSVGRLHPDFVPLELGM
ADKLVLKAIASVSGRRSEEVEDLWTKTGDPGEVAEMLIAKKKQMTLFSEPLSFQNVIEGL
TAIENASGKDSQDKKMKLLARMLHDSSPLEARYLCRIVTGRMRVGAGTMTAMDALASAFA
SKEDRPDIERAFNITCDMGLVAETLASGGLDAVKGIEVSVGNPVKVMLAERLRSLPEIME
RLGGKCAFEYKYDGIRVQAHIKKGPGGFVKLFSRRLEDLTSNFPDIGEALLRQLKGREAI
VEGECVAYDPDTGTLQPFQNVTHRRKKHGMEKAVEDIPVRIFLFDMLYCNGEDYTLKPYS
FRRMRLESSFKDDDSERYDRIGYTSRAIIDSDEKAQKFFDGAIAARCEGIMAKSLSEDSV
YRAGSRGFLWIKYKKDYTQALVDSFDLTVVGAFYGMGKRAGKYGALLMAAYDPDTGRFGT
ACKLGTGFDDAFLDAMPGLLEKYRCETKPASLDAEMVPDVWFIPGVVLEVTAADISLSPI
HTIAYGTVKEDAGLGLRFPRFTGRVRDDKTPEQCTTASEIVEFYRMQEDRDNGDVE
NT seq 1791 nt NT seq  +upstreamnt  +downstreamnt
atgcagttcggggatcttgcggaagtattcgacaggttggagaaaaccagcagccgtctg
gagatgacggacatactggccgaattcttcagaaatgtgaagcctgaggagatcagaaag
accatatacctctcggtcgggagactccacccggacttcgtccctctggaactgggcatg
gccgacaaactggtactgaaggcgatcgcatccgtatccgggagaaggtcggaggaggtc
gaggacctgtggacgaagaccggcgaccccggtgaggtcgccgagatgctcattgccaag
aagaaacagatgaccctgttctccgaacccctgtcgttccaaaacgtcatcgaaggcctc
acggccatagagaacgcatcgggcaaggactcccaggacaagaaaatgaaactgctggca
cgtatgctccacgactcgtcgcccctggaagccagatacctctgcaggatagtcaccggc
aggatgagagtcggcgccggaaccatgaccgcaatggatgcactcgcctcggcattcgcc
tccaaggaggatcgccccgatatagagagggcgttcaacataacgtgcgatatgggattg
gtggcggagaccctcgcatccggaggtcttgatgccgtgaaggggatagaggtctccgtc
gggaacccggtgaaggtgatgctcgcagaacgcctccgctccctcccggaaataatggaa
agattgggcggcaagtgcgcgttcgagtacaaatacgacggcatcagggtacaggcccac
ataaagaaggggccggggggattcgtaaagctgttctcaaggcgtctggaggacctcacc
tccaatttcccggacataggggaagctcttctgagacagctgaaggggagggaggcaata
gtcgagggcgagtgtgtagcatacgatccggacaccgggaccctccaacctttccagaac
gtgacccaccggcgtaagaaacacggcatggagaaggcggtggaggacatccccgtccgc
atattccttttcgacatgctctactgcaacggcgaggactataccctgaaaccgtactcc
ttccgcaggatgaggctcgaatcgtccttcaaagacgacgactccgaaagatacgaccgt
attgggtatacctccagggccataatcgattcggacgagaaggcccagaagttcttcgac
ggggccatagcggccagatgcgaagggataatggcgaaatccctgtccgaggattcggta
taccgggcggggtcgagaggattcctctggatcaaatacaagaaggactacacccaggca
ctcgtggattctttcgatctgacggtagtaggggcgttctacggcatgggcaaacgcgcc
gggaaatacggcgccctgctgatggccgcatacgacccggacaccggaaggttcggtacc
gcatgcaagctgggaacgggtttcgacgatgccttcctcgacgccatgcccggccttctg
gagaagtacaggtgcgagacgaagcccgcatccctggatgcggagatggtcccggacgta
tggttcatccccggggtcgtcctggaggtgacggctgcggacatcagcctgagccccata
cacaccatagcctacgggactgttaaggaggacgcaggactagggctccgcttcccacgg
tttaccggaagggtgagggacgacaagaccccggagcaatgcaccaccgcctcggagatc
gtagaattctaccgtatgcaggaagaccgtgacaacggcgatgtagaatga

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