KEGG   Methanosarcina barkeri Fusaro: Mbar_A3206
Entry
Mbar_A3206        CDS       T00271                                 
Name
(GenBank) putative tRNA pseudouridine synthase D
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
mba  Methanosarcina barkeri Fusaro
Brite
KEGG Orthology (KO) [BR:mba00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mba03016]
    Mbar_A3206
Enzymes [BR:mba01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     Mbar_A3206
Transfer RNA biogenesis [BR:mba03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    Mbar_A3206
 Prokaryotic type
    Mbar_A3206
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-ProteinID: AAZ72090
UniProt: Q466V2
LinkDB
Position
1:4121622..4122938
AA seq 438 aa
MQVPEIEKQIGITLYSTDTDGLGGQLRQEVEDFIVKEITNREEGQEGKYLILELIKRDWD
THHLTRTLAKILQVSQKRISVAGTKDKRALTTQKISIFDIDAQKIEKIHLKDVELKVLGR
SRKSVELGDLWGNNFRITIRNITHSSEEIHKLLEKTTNEILAQNGVPNFFGIQRFGSVRP
VTHLVGKAIVEGDFEKAALLYIAEPFPDEPEDTRKARQFVKETLDFKEGLKIYPLHLGHE
RAMMNHLIANPDDFAGAFLVLPKNLYRMFVHGYQSYIYNIILCRRIEKGLSLNEAVEGDV
VCFKNEHGLPDSSKTEKATTETVNAMNRLIKKKRAFITAPLPGHNTEFASGIPGEVEQAV
LDELKVPLQGFNIEETPEMSSKGTRRELLLQVEPKFEVAEDELNPGKLKAVLEFMLPKGS
YATTVLREYMKVDPLQMS
NT seq 1317 nt   +upstreamnt  +downstreamnt
atgcaagtgccggaaattgaaaaacagatcggaataactctttactccacggatactgac
ggcctcggagggcagcttcggcaggaagtggaggattttattgttaaagaaattacaaac
cgggaggaaggacaggaagggaaataccttattcttgaactcataaagcgagactgggac
acacatcacctgacccggactcttgcaaaaatcctccaggtaagccagaagcgaatcagc
gttgcaggcacaaaggacaagcgtgcacttaccactcagaaaatcagtatttttgacatt
gacgcccagaaaattgagaagatccatttaaaagatgtagagctgaaagtccttggtcgc
tcccgaaaatccgttgaactcggagacctgtggggaaacaatttcagaattactatccgg
aatataacccactcgagtgaggagatacacaaactgctcgaaaagaccacaaacgagatc
ctggctcagaacggagttccgaacttcttcgggatccagcgctttggctcggtacgtcct
gtcacgcatcttgtaggaaaagccattgttgagggagattttgaaaaggctgccctgcta
tatattgccgaacccttccctgatgagccagaagatacacggaaagcccgccagtttgtt
aaagagaccctcgatttcaaagaaggcctgaaaatctatcctctccacctcgggcatgaa
agagcaatgatgaatcatctgatcgcaaacccggatgactttgcaggagcttttctcgtt
ctcccgaaaaacctttacaggatgtttgtgcacggctaccagtcctacatatataacata
atcctgtgcaggaggatcgaaaaaggcctttccttaaacgaggccgtagaaggtgatgtt
gtctgtttcaagaatgaacatggcctgccggattcttcaaaaaccgaaaaagccaccaca
gaaaccgtaaatgccatgaaccgcctgattaagaaaaaacgggccttcataaccgctccc
cttccgggccataatacagaatttgcgtcaggcattcctggagaggtcgaacaggcagtt
ctcgatgaactcaaagtccctctgcaaggcttcaatatagaagaaactcctgagatgagt
tcgaaaggcaccaggcgggaactcctccttcaggttgaaccgaagtttgaggttgctgaa
gacgaactgaacccgggaaagttaaaagctgtgcttgagttcatgctgccaaagggaagt
tacgcaacaaccgtgctgcgggagtacatgaaggtagatcctctgcaaatgagttga

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