Methanosarcina barkeri Fusaro: Mbar_A3206
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Entry
Mbar_A3206 CDS
T00271
Name
(GenBank) putative tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mba
Methanosarcina barkeri Fusaro
Brite
KEGG Orthology (KO) [BR:
mba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mba03016
]
Mbar_A3206
Enzymes [BR:
mba01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Mbar_A3206
Transfer RNA biogenesis [BR:
mba03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Mbar_A3206
Prokaryotic type
Mbar_A3206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AAZ72090
UniProt:
Q466V2
LinkDB
All DBs
Position
1:4121622..4122938
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AA seq
438 aa
AA seq
DB search
MQVPEIEKQIGITLYSTDTDGLGGQLRQEVEDFIVKEITNREEGQEGKYLILELIKRDWD
THHLTRTLAKILQVSQKRISVAGTKDKRALTTQKISIFDIDAQKIEKIHLKDVELKVLGR
SRKSVELGDLWGNNFRITIRNITHSSEEIHKLLEKTTNEILAQNGVPNFFGIQRFGSVRP
VTHLVGKAIVEGDFEKAALLYIAEPFPDEPEDTRKARQFVKETLDFKEGLKIYPLHLGHE
RAMMNHLIANPDDFAGAFLVLPKNLYRMFVHGYQSYIYNIILCRRIEKGLSLNEAVEGDV
VCFKNEHGLPDSSKTEKATTETVNAMNRLIKKKRAFITAPLPGHNTEFASGIPGEVEQAV
LDELKVPLQGFNIEETPEMSSKGTRRELLLQVEPKFEVAEDELNPGKLKAVLEFMLPKGS
YATTVLREYMKVDPLQMS
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtgccggaaattgaaaaacagatcggaataactctttactccacggatactgac
ggcctcggagggcagcttcggcaggaagtggaggattttattgttaaagaaattacaaac
cgggaggaaggacaggaagggaaataccttattcttgaactcataaagcgagactgggac
acacatcacctgacccggactcttgcaaaaatcctccaggtaagccagaagcgaatcagc
gttgcaggcacaaaggacaagcgtgcacttaccactcagaaaatcagtatttttgacatt
gacgcccagaaaattgagaagatccatttaaaagatgtagagctgaaagtccttggtcgc
tcccgaaaatccgttgaactcggagacctgtggggaaacaatttcagaattactatccgg
aatataacccactcgagtgaggagatacacaaactgctcgaaaagaccacaaacgagatc
ctggctcagaacggagttccgaacttcttcgggatccagcgctttggctcggtacgtcct
gtcacgcatcttgtaggaaaagccattgttgagggagattttgaaaaggctgccctgcta
tatattgccgaacccttccctgatgagccagaagatacacggaaagcccgccagtttgtt
aaagagaccctcgatttcaaagaaggcctgaaaatctatcctctccacctcgggcatgaa
agagcaatgatgaatcatctgatcgcaaacccggatgactttgcaggagcttttctcgtt
ctcccgaaaaacctttacaggatgtttgtgcacggctaccagtcctacatatataacata
atcctgtgcaggaggatcgaaaaaggcctttccttaaacgaggccgtagaaggtgatgtt
gtctgtttcaagaatgaacatggcctgccggattcttcaaaaaccgaaaaagccaccaca
gaaaccgtaaatgccatgaaccgcctgattaagaaaaaacgggccttcataaccgctccc
cttccgggccataatacagaatttgcgtcaggcattcctggagaggtcgaacaggcagtt
ctcgatgaactcaaagtccctctgcaaggcttcaatatagaagaaactcctgagatgagt
tcgaaaggcaccaggcgggaactcctccttcaggttgaaccgaagtttgaggttgctgaa
gacgaactgaacccgggaaagttaaaagctgtgcttgagttcatgctgccaaagggaagt
tacgcaacaaccgtgctgcgggagtacatgaaggtagatcctctgcaaatgagttga
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