Candidatus Methylopumilus turicensis: BN1209_0110
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Entry
BN1209_0110 CDS
T03844
Symbol
rsmB
Name
(GenBank) 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
mbac
Candidatus Methylopumilus turicensis
Brite
KEGG Orthology (KO) [BR:
mbac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mbac03009
]
BN1209_0110 (rsmB)
Enzymes [BR:
mbac01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
BN1209_0110 (rsmB)
Ribosome biogenesis [BR:
mbac03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
BN1209_0110 (rsmB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
Methyltransf_31
Methyltransf_25
FtsJ
PCMT
Methyltransf_15
Methyltransf_5
Motif
Other DBs
NCBI-ProteinID:
CEN55164
UniProt:
A0A0B7IS83
LinkDB
All DBs
Position
1:98618..99901
Genome browser
AA seq
427 aa
AA seq
DB search
MHISQQIAAEAIGQVFAGRNLGVVLDGLFSRYSNITPQQRAVAQDLSYGTLRFYGAIQSL
LDQLLQKPLDDARLQCLLLVAVYQLQYDKAASHTVVDQAVKAASQSKKTWAKGLVNGVLR
NFLRQQAELLTNIQDDEFAKYSYPAWWITKLRYQYPNNWQEMLEAGNQHPPMILRVNQRQ
ISSADFIAKLSAEGIASQALGANAVMLEKPIPVDLIPGFADGEASVQDYAAQVAGYALDL
QSGQRVLDACCAPGGKTGQILELADVDLVAVDNDETRIARTQSNLERLKLKATLLVGDAG
KSADWWDGKPFDRILADVPCTASGIVRRHVDIKWLRREADIASFTRQQAQILPSLWQLLA
KGGKLLYVTCSVFQEENQRQIDSFLKLHADAEQLPLNEPISGLTLNDGQLKPGAQHDGLF
YALLQKH
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
gtgcatatctcacaacaaattgccgcagaggcaattggacaagtttttgcgggccgcaat
ttaggcgtcgtactagacggcttattttctagatattcaaatatcacacctcagcaacgt
gcagttgctcaagatttgagttatggcactttgcggttctacggtgcaatacagtctttg
ttggatcagcttttgcaaaaaccgttggatgacgcacgtttacagtgcttgttgttggtt
gcagtctatcagctgcaatacgacaaagcggcttcgcatacggtggtcgatcaagcggtc
aaggctgcttcgcagtctaaaaaaacgtgggcaaaaggtttggtcaatggcgtgttacgt
aactttctacgtcaacaagccgaattgttgacgaatattcaagatgacgaattcgcgaaa
tactcttacccagcttggtggattactaagctgagataccaatatccaaacaattggcag
gaaatgctggaagctggaaatcagcatccgccgatgatattacgtgtcaatcagcgacaa
atttcatctgctgattttatcgccaaactcagtgcggaagggattgcctcccaagcgctt
ggtgcgaatgcagtaatgttggaaaagcctattcctgttgatcttatcccaggctttgca
gatggcgaagcttcggtacaggattacgcagcacaagtcgctggttatgcgctggattta
caaagtgggcaacgtgttttagatgcttgttgcgctccagggggtaaaacaggccaaatt
ttagagttggcagatgtcgatttagtcgcagtggataatgatgaaacgcgtatcgcacgg
actcaaagtaatcttgagcgtttaaaactgaaagcgactttgctggttggggatgcaggc
aagtcagcagactggtgggatggcaagccattcgatcgtattttggcggatgtcccgtgt
acggcttcaggcattgtgcgacgtcatgtggatattaaatggttacgtcgcgaggccgat
attgcttcattcactagacagcaagcgcagatattgccatctttgtggcagctattagca
aagggtggtaaattgctttacgtgacttgctcagtgtttcaagaagaaaatcagcggcaa
attgatagttttttgaagttgcatgcagatgcggagcaattgcctttaaatgaaccaatt
tcaggcttgactttaaacgatggacaactaaaaccgggtgcccagcatgatggtttattt
tatgcgttactacagaagcactaa
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