KEGG   Candidatus Methylopumilus turicensis: BN1209_0443
Entry
BN1209_0443       CDS       T03844                                 
Symbol
ymfC
Name
(GenBank) 23S rRNA pseudouridine synthase
  KO
K06181  23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
Organism
mbac  Candidatus Methylopumilus turicensis
Brite
KEGG Orthology (KO) [BR:mbac00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mbac03009]
    BN1209_0443 (ymfC)
Enzymes [BR:mbac01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.20  23S rRNA pseudouridine2457 synthase
     BN1209_0443 (ymfC)
Ribosome biogenesis [BR:mbac03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    BN1209_0443 (ymfC)
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: CEN55492
UniProt: A0A0B7IWN6
LinkDB
Position
1:406522..407052
AA seq 176 aa
MLILFNKPYGVVCQFSAHENHETLADYIAIPNVYAAGRLDTDSEGLLILTDDGALQHRVS
HPKYKEIKTYWAQVEGAPTQADLMPLLKGVDLGDFVTAPAQVKVIPEPAHLWPRNPPIRE
RKAIPTTWVEIKISEGKNRQVRRMTAKVGFPTLRLIRYAIGQHTLDDLPLGTWRQV
NT seq 531 nt   +upstreamnt  +downstreamnt
atgttaattctgttcaataagccctacggtgtggtttgccaatttagtgcacacgaaaat
cacgaaacattggctgattatattgctatcccaaatgtctatgccgctggcagactcgat
acggatagcgaaggtttgcttattttaaccgatgatggcgcacttcaacaccgtgtttcg
cacccaaagtataaagaaatcaaaacttattgggcgcaagtcgagggtgctcctacccaa
gcagatttaatgccacttttaaaaggggtggacttgggtgattttgtgaccgcgccagcg
caagtgaaagtcattccggaacccgctcatttatggcctcgcaatccgcccattcgcgag
cgcaaagccatccccaccacatgggtggagattaaaatttcagaaggtaaaaatcgtcag
gtgcgccgaatgaccgccaaagtgggttttccaactttacgattgattcgatatgcgatt
gggcaacataccttggatgatttgccattgggcacttggcggcaagtctag

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