Candidatus Methylopumilus turicensis: BN1209_0443
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Entry
BN1209_0443 CDS
T03844
Symbol
ymfC
Name
(GenBank) 23S rRNA pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
mbac
Candidatus Methylopumilus turicensis
Brite
KEGG Orthology (KO) [BR:
mbac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mbac03009
]
BN1209_0443 (ymfC)
Enzymes [BR:
mbac01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
BN1209_0443 (ymfC)
Ribosome biogenesis [BR:
mbac03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BN1209_0443 (ymfC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
CEN55492
UniProt:
A0A0B7IWN6
LinkDB
All DBs
Position
1:406522..407052
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AA seq
176 aa
AA seq
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MLILFNKPYGVVCQFSAHENHETLADYIAIPNVYAAGRLDTDSEGLLILTDDGALQHRVS
HPKYKEIKTYWAQVEGAPTQADLMPLLKGVDLGDFVTAPAQVKVIPEPAHLWPRNPPIRE
RKAIPTTWVEIKISEGKNRQVRRMTAKVGFPTLRLIRYAIGQHTLDDLPLGTWRQV
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgttaattctgttcaataagccctacggtgtggtttgccaatttagtgcacacgaaaat
cacgaaacattggctgattatattgctatcccaaatgtctatgccgctggcagactcgat
acggatagcgaaggtttgcttattttaaccgatgatggcgcacttcaacaccgtgtttcg
cacccaaagtataaagaaatcaaaacttattgggcgcaagtcgagggtgctcctacccaa
gcagatttaatgccacttttaaaaggggtggacttgggtgattttgtgaccgcgccagcg
caagtgaaagtcattccggaacccgctcatttatggcctcgcaatccgcccattcgcgag
cgcaaagccatccccaccacatgggtggagattaaaatttcagaaggtaaaaatcgtcag
gtgcgccgaatgaccgccaaagtgggttttccaactttacgattgattcgatatgcgatt
gggcaacataccttggatgatttgccattgggcacttggcggcaagtctag
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