Candidatus Methylopumilus turicensis: BN1209_1712
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Entry
BN1209_1712 CDS
T03844
Gene name
metH
Definition
(GenBank) homocysteine-N5-methyltetrahydrofolate transmethylase, B12-dependent
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
mbac
Candidatus Methylopumilus turicensis
Pathway
mbac00270
Cysteine and methionine metabolism
mbac00450
Selenocompound metabolism
mbac00670
One carbon pool by folate
mbac01100
Metabolic pathways
mbac01110
Biosynthesis of secondary metabolites
mbac01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
mbac00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
BN1209_1712 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
BN1209_1712 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
BN1209_1712 (metH)
Enzymes [BR:
mbac01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
BN1209_1712 (metH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
CEN56749
UniProt:
A0A0B7J278
LinkDB
All DBs
Position
1:1677222..1681073
Genome map
AA seq
1283 aa
AA seq
DB search
MTLFSPTEQILRDLLAKRILILDGAMGTMIQQYKLNEADYRGGENGRFKDFKGPAGAEFC
NKGSSCGCGANHNPAPTETTRELFVKGNNELLSLTQPHVIQEIHEQYFAAGADIVETNTF
GATTVAQDDYHMAHLAYEMNLASAKLALAARDKYSTPDKPRFVAGALGPTPKTASISPDV
NDPAARNVTFDQLVAAYLEQTRALVEGGVDILMVETIFDTLNCKAALFAIETFFEESGKR
LPLMISGTVTDASGRILSGQTVPAFWHSVRHAKPLTIGLNCALGAALMRPYAQELSKIAD
TFVCIYPNAGLPNPMSDTGFDEKPADTSALLKEFAENGFINIAGGCCGTTPPHIKAIADT
LKTIAPRQIPTVEKTTKLSGLEPFFIDDNSLFVNVGERTNVTGSKAFARMILNEQFEEAL
HVARQQVENGAQIIDINMDEGMLDAIKAMSHFLNLVASEPDIARVPIMIDSSKWDVIEAG
LKCVQGKSIVNSISMKEGEEEFLRQARLCMRYGAAIIVMAFDEKGQADTFERKIEICKRA
YDLLVDKVGFPAEDIIFDPNIFAIATGIEEHNNFAVDFINATRWIKENLPHAKISGGVSN
VSFSFRGNEPAREAIHTVFLYHAIKAGMTMGIVNAGMIGIYDDLPEALRECVEDVVLNRR
PDATERMIEMAGTLTAGGKKEAATLEWRGTPENPVSVQKRLAHALIHGITEFINEDTEEA
RVEALQNGGRPIHVIEGPLMDGMNIVGDLFGQGKMFLPQVVKSARVMKQAVAHLIPFIEE
EKLLEEKRTGVAAKPKGKMVIATVKGDVHDIGKNIVSVVLQCNNFEVVNMGVMVPCSEIL
ALAKAENADIIGLSGLITPSLEEMAHVAREMQRDPYFRGLKTPLLIGGATTSRAHTAVKI
APHYDGPVVYVPDASRSVAVMQSLVSPEQRDAYITELNADYERARHQHANKKGVPMLSIE
DARQNKTKLAFTGNNAPVKPKFIGRRVLENIDLATIAQYIDWGPFFQTWDLAGAYPAILK
DPMVGETATKLFADGQALLKKIIEGRWLTANGVLSLLPANSVNEDDIEIYKDESRKEVAF
TYYGMRQQTEKPVIDGVPRPNQCLADFIAPKESGVEDYIGMFAVTAGLGIEKHLKRFEDA
HDDFNSIMLKSLADRLAEAFSEYLHERVRTDLWGYAAQEKLSCEALIKEEYQGIRPAPGY
PACPDHTVKADMFKVMQATEIGMSLTDAYAMNPAAAVSGYYFAHPEAKYFSVDKIGEDQL
TELAKRRGMNKEELARWLAPNLG
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atgacactgttttcccctaccgaacaaatcctgcgagatctattagccaaacgcattctc
atcttagatggtgcgatgggcacgatgattcagcaatacaagcttaacgaagcagactac
cgcggcggagagaacggtcgattcaaagattttaaaggcccggctggcgcggaattctgc
aataaaggctcctcttgcggttgtggcgcaaaccataatccagccccaacagaaaccacg
cgtgagctgtttgtaaagggcaacaacgagctattaagtcttacacaacctcacgtcatt
caagagatccacgaacaatatttcgcggctggcgcagacattgttgaaaccaatactttt
ggggcaaccactgtggcgcaagacgattaccacatggcccacttggcttacgaaatgaat
ttggcttctgccaagctagcccttgccgcacgagacaaatacagcacccctgacaagcca
agatttgtcgcaggcgctttaggcccaacacccaaaacggcttcgatttccccagacgtc
aacgatcccgctgcacgcaatgtgacttttgatcaactagttgccgcttatcttgagcaa
acacgcgctttggttgagggtggcgtagatattttgatggtggaaaccatctttgatacg
cttaactgtaaagccgcattatttgcgattgagactttcttcgaagaaagcgggaaacgt
ctaccgctaatgatttccgggacggtcaccgatgcttctggtcgtattttatctggtcaa
accgtgcccgctttttggcactcggttcgccacgcaaaaccactgactatcggcttgaat
tgtgcgcttggcgccgccttgatgcgcccgtatgcacaagagctttcaaaaatcgctgat
acttttgtttgtatttacccgaatgcaggtttgccgaatccaatgtcagacacagggttt
gatgaaaaacctgccgacacttcagccttactaaaagagtttgctgaaaacggctttatc
aatattgctggcggctgttgcggtacaacaccgccccacatcaaagcgattgctgacacg
ctaaaaacaattgcaccacggcaaattccaactgttgaaaagacgactaaactttctggg
cttgagccgttcttcattgacgacaattcactctttgtaaacgtcggtgagcgaactaat
gtcactggctcaaaagcttttgctcgcatgattttgaacgagcagtttgaagaagcactt
catgtggcacgccaacaagttgaaaacggcgcacaaatcatcgacatcaacatggatgaa
ggcatgttagatgccatcaaggccatgtctcacttcttgaacttggtcgcgtcagaacct
gatattgcacgtgtgccgattatgatcgactcatcgaagtgggacgtcattgaggccggc
ctcaaatgtgtgcaaggcaaatcgatcgttaattcaatctcgatgaaagagggcgaggaa
gagttcttacgccaagccagattatgcatgcgctatggcgcagcaattattgtgatggcc
tttgatgaaaaaggccaagcggacacgtttgagcgcaaaattgaaatttgcaaacgcgct
tatgacttactcgtcgataaagttggcttccctgctgaagacattatttttgacccaaac
atttttgcgattgcaaccggcatcgaagaacacaacaacttcgccgtcgatttcatcaat
gccacgcgctggattaaagaaaatctaccgcatgccaaaatttctggcggggtgtcaaac
gtaagctttagcttccgtggtaacgagcccgcccgcgaagcgattcataccgtgtttcta
tatcatgcgattaaagccggcatgacgatgggcatcgtcaatgcgggcatgattggtatc
tatgatgacttgccagaagccttgcgtgagtgcgtagaagatgtcgtgctcaaccgtcgc
ccagatgcaacagaacgaatgattgaaatggcgggcacactgactgctggtggcaaaaaa
gaagccgcgacacttgagtggcgtggtacgccagaaaatcctgtcagcgttcaaaaacgt
ttagcccacgctctcattcatggcatcactgaattcattaatgaagatacagaagaagcg
cgtgttgaagcgttacaaaacggcggccgacccattcatgtgattgaaggcccactcatg
gatggcatgaacatcgtgggagatttgttcgggcaaggcaaaatgttcttaccccaagta
gtgaagtcagcccgcgttatgaaacaagcagttgcgcacctcattcctttcattgaggaa
gagaaacttttagaagaaaaacgcacaggcgtcgccgcaaaaccaaaaggcaaaatggtc
attgcaaccgtcaaaggtgacgtgcatgacatcggcaaaaacatcgtttccgtggtttta
caatgcaataacttcgaagtcgtgaacatgggcgtaatggtgccatgttcagaaatctta
gccttagctaaagctgaaaatgcagacatcattggcttatctggcttgattaccccatca
cttgaagaaatggcgcatgttgcccgcgaaatgcaacgtgatccttatttccgcggactt
aaaacaccactcttaattggtggcgcaacgacatcacgcgcccataccgcggtaaaaatc
gcaccgcattatgatgggcccgtggtgtatgtgccagatgcctctcgttccgttgccgtc
atgcaatcactcgtatcgccagaacaacgcgacgcttatattacagaactgaatgcagac
tacgaacgtgctcgtcatcaacacgccaacaaaaaaggcgtgccgatgttgtcgattgaa
gacgcacgtcaaaataaaaccaagcttgcattcacggggaataatgcgcccgtcaaacct
aagtttattggtcgccgtgtattagaaaatattgatttagccacgattgcccaatacatc
gattggggtccttttttccaaacttgggatttagcaggggcttacccggcaattcttaaa
gatcctatggtgggtgaaactgcgacaaaattatttgccgacggccaagcgctgctcaag
aaaatcattgaaggccgatggctcacagcgaatggcgtactttcattattgccagccaat
agcgtgaatgaggacgacatcgaaatctataaagatgaaagccgcaaagaagttgcattt
acttattacggcatgcgccaacaaacagaaaaaccagtcatcgatggcgtacctcgcccg
aaccaatgcctcgcagacttcatcgcacccaaagagtctggtgttgaagattacatcggc
atgtttgcagtgactgctggcctcggtattgaaaaacatcttaaacgcttcgaagatgct
catgatgactttaatagcatcatgctgaaatcattggctgaccgtttggctgaggccttt
tcagaatatctacatgaacgtgtccgcacagatttgtggggatatgcggcacaagaaaaa
ctgagttgcgaagctttgattaaagaagagtatcaaggcattagaccagcacccggctat
cccgcttgtcccgaccataccgtcaaagccgacatgtttaaagtgatgcaagcgacagaa
attggcatgtcactgaccgacgcttacgcaatgaacccagctgcagcagtttctggttat
tattttgcacaccctgaagccaagtactttagtgtggataaaattggtgaagatcaactc
accgagttagctaaaagacgtggcatgaataaagaagaattggcacgctggctcgcccct
aatttaggctaa
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integrated database retrieval system
