Aquirhabdus parva: HYN46_16315
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Entry
HYN46_16315 CDS
T05575
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
mbah
Aquirhabdus parva
Pathway
mbah00521
Streptomycin biosynthesis
mbah00523
Polyketide sugar unit biosynthesis
mbah00525
Acarbose and validamycin biosynthesis
mbah00541
O-Antigen nucleotide sugar biosynthesis
mbah01100
Metabolic pathways
mbah01110
Biosynthesis of secondary metabolites
mbah01250
Biosynthesis of nucleotide sugars
Module
mbah_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
mbah00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
HYN46_16315 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HYN46_16315 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
HYN46_16315 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HYN46_16315 (rfbB)
00525 Acarbose and validamycin biosynthesis
HYN46_16315 (rfbB)
Enzymes [BR:
mbah01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
HYN46_16315 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
GARS_N
NAD_binding_10
NmrA
Motif
Other DBs
NCBI-ProteinID:
AXI04261
UniProt:
A0A345PAF2
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All DBs
Position
3608720..3609781
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AA seq
353 aa
AA seq
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MAILVTGAAGFIGSNFVLDWIAHHDELVISLDKLTYAGNLANLASVASNPQHLFVQADIA
DTDIISELLSKHDVRAVLNFAAESHVDRSITGPEEFIQTNIVGTFKLLETVRTYWSALDE
KPKAEFRFLHVSTDEVYGSLSKTDPAFSETNRYEPNSPYSASKAASDHLVRAYHHTYGLP
VLTTNCSNNYGPYHFPEKLIPLCILNALSGKNLPIYGDGQQIRDWLYVTDHCSAIRRVLE
AGTLGETYNVGGWNEKANLDVVNTLCSILDELKPRADGQPYKTQIVFVKDRAGHDRRYAI
DATKLERELGWKPAETFETGIRKTVEWYLANQAWVSNVTSGAYRDWVSQQYQA
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggcaattttggtaacaggcgcagcaggctttattggcagtaactttgttttggattgg
attgctcatcacgatgagctcgtaatcagcttggacaaattaacctatgcagggaatctt
gcaaatttagcctcggtggcatccaacccacagcatctttttgtgcaagcagatatcgca
gatacggacatcattagcgaattactctccaagcatgacgtcagagccgtcctcaatttt
gcagcagaaagccatgttgatcgctccattactggtcctgaagaatttatccaaaccaat
attgtcggcaccttcaaactgcttgaaactgtgcgtacgtattggtctgcgcttgatgaa
aagcctaaagcagaattccgcttcctgcatgtctccacggatgaagtctacggatcctta
agtaaaactgatccagcattcagcgagaccaaccgctatgaacccaatagcccgtactct
gcaagtaaggcggcatcagatcacttggttcgcgcatatcaccatacctacggtctacct
gtactaacgactaactgttcaaacaattatggtccatatcacttccctgaaaaactgatt
ccattgtgcatcttaaacgcactcagcggtaaaaacctaccgatatacggagacggacaa
caaattcgtgactggctatacgtcaccgaccactgcagcgcaatccgtcgtgttttagaa
gccggcaccttgggtgaaacatacaacgtaggcggctggaatgaaaaagccaacctagat
gtcgtcaataccttatgcagcatcctagatgaattaaagcctcgcgcagatggccaacct
tataaaacccaaatcgtctttgtcaaagaccgtgcgggacatgatcgtcgctatgccata
gatgccaccaaacttgagcgtgaactcggctggaaaccggcggagacctttgaaacaggt
attcgtaaaacggttgaatggtatctcgccaatcaagcatgggtgagcaatgtcaccagt
ggtgcatatcgtgactgggttagtcagcaataccaagcatga
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