Methanosarcina barkeri 227: MSBR2_1458
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Entry
MSBR2_1458 CDS
T03914
Name
(GenBank) DNA double-strand break repair Rad50 ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mbar
Methanosarcina barkeri 227
Brite
KEGG Orthology (KO) [BR:
mbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbar03400
]
MSBR2_1458
DNA repair and recombination proteins [BR:
mbar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MSBR2_1458
Archaeal homologous recombinant proteins
MSBR2_1458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_27
SMC_N
AAA_21
AAA_15
AAA_29
SbcC_Walker_B
Motif
Other DBs
NCBI-ProteinID:
AKB57974
UniProt:
A0A0E3R2Y2
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All DBs
Position
1896759..1899185
Genome browser
AA seq
808 aa
AA seq
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MIIKNIKLNPFGGLADKELNLDKGLNVICGPNEAGKSTIYNGIQKVLFLPSNLRKNGKQY
KEIQKYIPIGGGDTAKVEMQFLHEGNVFTLRRMWGGSNTSELKLPDGTLLTEESSIQKQL
ELLLVAKEGTYRSILMTYQNGLSKTLEDLINNQDTVYSLGDIIRKTMHETDGVSVDEFRK
EIDFLYNDYFEHWDRELKRPQNGKELENRYRNGVGRILKAYYEKEEIDREFVKAQKYEEK
ISDINQKISDCNNMILEKREYVEKNKKVVEDAQTRKIFDANKESLNLSIKNLSEVNRNWP
VLENKIKELNEQISKNKEKLEELNKEKKLADLQEKNKKLIEQAERVNNFKKEQEEAENAL
RSVKKLTEDDFEKIREKLSKLNTLKTKLTAGKLKVQFEARKDVTISIQKDLEKEYSKELF
ENEIEAFEAGGKLKLEHPNWVIEVSSGEDNIEQLISECIATEKEFKDFLTGYQADSIEEA
RIIYKKYQALKIAFDKKNDALTRELGEELSYAEFCKKIEKLGPIQETRVLVQIISDVKEL
ENEINNADKELKQYQTQIEKYKKEYGTEEELLLSYSSKIYQRKELEEKEQKLSPLPEGIE
VPDIFIEEYKKEEDKLNSAKDKKEELREEWFEIERNAPNESSEELMKKRMDFEAELHSTL
RRGEAIARIRDLSIKIQEEMDSSIYSDLKKVIEGQISTLTDSRYTAVKMEESIPRGFIRN
DGEILDYELLSAGTKDALSLALRISMAKYFLKEAEGFLIMDDPFVDMDPERQQRAGEIIR
KFAEDKQVVIFTCHPMHAKILGGNQITL
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgataataaaaaatataaagctcaatccttttggggggctagctgacaaagaattaaac
cttgataaagggcttaacgtaatttgtggacctaacgaagccgggaaatctacaatatat
aatggaatacaaaaagttctatttttaccttcaaacctcagaaaaaatggcaaacagtac
aaagaaatacagaaatacattcccattgggggaggagatactgcaaaagttgaaatgcag
tttctccatgaaggtaatgtgtttactttgagaaggatgtggggaggttcaaacacttca
gagttgaaattgcctgatggcacattactcactgaggaaagtagcattcaaaaacaactt
gagcttctgctagttgcaaaagaaggaacatatagatcaatactgatgacttatcagaac
ggtttgtccaaaactctcgaagatttgattaacaaccaggatacagtatactcattgggg
gatatcatccgtaaaacaatgcatgaaactgacggtgtatcagtggatgaattcaggaag
gaaatagattttttgtataatgattattttgagcattgggaccgagaactaaaaagaccc
cagaatggaaaagagcttgaaaaccgctatagaaatggtgttgggcgtatccttaaagca
tattatgagaaggaagaaattgatagagaattcgtaaaggcccaaaaatatgaggaaaaa
atcagtgatatcaaccagaaaatatccgattgtaataatatgatcttagaaaaaagagag
tatgtcgagaagaataaaaaagttgtggaagatgcacaaactcgcaagatttttgatgca
aataaagagtcactaaatttgagtattaagaatttatctgaagtaaacagaaattggcct
gtacttgagaataaaatcaaggagcttaatgaacaaatctcaaaaaataaagaaaaatta
gaagaactaaacaaggagaaaaaactcgcagatttgcaagaaaagaacaaaaagttaatt
gaacaagctgaaagggtaaacaacttcaaaaaagaacaggaagaagctgaaaacgcactg
agatctgtgaaaaaactaacagaggatgattttgaaaaaatcagagaaaaattaagcaaa
ttaaatactcttaaaacaaaactaactgctggaaaactcaaagtccaatttgaagctaga
aaagatgttactatttccattcagaaggatttagagaaggaatactcaaaggaacttttt
gagaatgaaattgaggcttttgaagccggaggaaaattgaaactcgaacatcctaactgg
gtaattgaggtaagttcaggagaagataatattgaacagctaataagcgaatgcatagct
actgaaaaagaatttaaagattttttaactggatatcaagcagattccattgaagaagca
cgcattatttataaaaagtatcaagctctgaagatagcttttgacaagaagaatgatgct
ttgacaagagaacttggggaagagctctcctatgcagaattctgcaagaaaattgaaaaa
cttggtccaatccaagaaacaagagtcctagttcagattatttctgatgttaaagaactt
gaaaacgagattaataatgctgataaggaattaaaacagtaccaaactcaaattgaaaag
tacaaaaaagaatatgggacagaggaagaacttttactttcttattccagcaaaatatat
caaagaaaggagcttgaagaaaaagagcaaaagctctctcctttgcccgaaggaatagaa
gtcccagatattttcatagaagagtataaaaaagaagaggataaattaaattctgcaaaa
gacaaaaaagaagaacttcgagaggaatggtttgaaatcgaaagaaatgctccaaatgaa
tcttccgaagagcttatgaaaaaacgaatggatttcgaagctgaactccattctactcta
agaagaggagaagctatagctcgaattagagatttaagcatcaagattcaagaagagatg
gactcttccatatattcggacctgaaaaaagtaattgaaggacaaatctcaaccctaacc
gattcgcggtatacagccgttaaaatggaagaaagcataccgagaggttttattcgaaat
gatggagaaatcctcgactatgagttactatctgcaggaacaaaggacgcgctgtctctg
gcccttcgaatatcaatggcaaaatattttctgaaagaagcagagggcttcctgataatg
gatgacccctttgtagatatggaccctgagagacagcaaagggctggagaaattatccga
aagtttgcagaggataagcaggtagtaatctttacatgtcaccctatgcatgctaagatt
cttggagggaaccagataacattgtaa
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