Mycobacterium tuberculosis variant bovis BCG Mexico: BCGMEX_0962c
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Entry
BCGMEX_0962c CDS
T01727
Name
(GenBank) Hypothetical protein
KO
K10979
DNA end-binding protein Ku
Organism
mbm
Mycobacterium tuberculosis variant bovis BCG Mexico
Pathway
mbm03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mbm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
BCGMEX_0962c
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbm03400
]
BCGMEX_0962c
DNA repair and recombination proteins [BR:
mbm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
BCGMEX_0962c
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
TF_Zn_Ribbon
MmoB_DmpM
zf-ACC
Motif
Other DBs
NCBI-ProteinID:
AET18246
LinkDB
All DBs
Position
complement(1045955..1046776)
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AA seq
273 aa
AA seq
DB search
MRAIWTGSIAFGLVNVPVKVYSATADHDIRFHQVHAKDNGRIRYKRVCEACGEVVDYRDL
ARAYESGDGQMVAITDDDIASLPEERSREIEVLEFVPAADVDPMMFDRSYFLEPDSKSSK
SYVLLAKTLAETDRMAIVHFTLRNKTRLAALRVKDFGKREVMMVHTLLWPDEIRDPDFPV
LDQKVEIKPAELKMAGQVVDSMADDFNPDRYHDTYQEQLQELIDTKLEGGQAFTAEDQPR
LLDEPEDVSDLLAKLEASVKARSKANSNVPTPP
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgcgagccatttggacgggttcgatcgccttcgggctggtgaacgtgccggtcaaggtg
tacagcgctaccgcagaccacgacatcaggttccaccaggtgcacgccaaggacaacgga
cgcatccggtacaagcgcgtctgcgaggcgtgtggcgaggtggtcgactaccgcgatctt
gcccgggcctacgagtccggcgacggccaaatggtggcgatcaccgacgacgacatcgcc
agcttgcctgaagaacgcagccgggagatcgaggtgttggagttcgtccccgccgccgac
gtggacccgatgatgttcgaccgcagctactttttggagcctgattcgaagtcgtcgaaa
tcgtatgtgctgctggctaagacactcgccgagaccgaccggatggcgatcgtgcatttc
acgctgcgcaacaagaccaggctggcggcgttgcgcgtcaaggatttcggcaagcgagag
gtgatgatggtgcacacgttgctgtggcccgatgagatccgcgaccccgacttcccggtg
ctggaccagaaggtggagatcaaacccgcggaactcaagatggccggccaggtggtggac
tcgatggccgacgacttcaatccggaccgctaccacgacacctaccaggagcagttacag
gagctgatcgacaccaaactcgaaggtgggcaggcatttaccgccgaggaccaaccgagg
ttgctggacgagcccgaagacgtctccgacctgctcgccaagctggaggccagcgtgaag
gcgcgctcgaaggccaactcaaacgtcccaacgcctccgtga
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