Maize bushy stunt phytoplasma: MBSPM3_v1c1170
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Entry
MBSPM3_v1c1170 CDS
T04456
Symbol
rnhC
Name
(GenBank) ribonuclease HIII
KO
K03471
ribonuclease HIII [EC:
3.1.26.4
]
Organism
mbp
Maize bushy stunt phytoplasma
Pathway
mbp03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
mbp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MBSPM3_v1c1170 (rnhC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mbp03032
]
MBSPM3_v1c1170 (rnhC)
Enzymes [BR:
mbp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
MBSPM3_v1c1170 (rnhC)
DNA replication proteins [BR:
mbp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
MBSPM3_v1c1170 (rnhC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_HII
DUF3378
Cas5fv_helical
RnlA_toxin
Motif
Other DBs
NCBI-ProteinID:
AOF54651
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All DBs
Position
124933..125922
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AA seq
329 aa
AA seq
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MSNYSFKLNNNQVATIKKFYYKQLKLSPNKTVAFVIDESLAKITVYNNGTLLVQGKNTLS
IVAFIKKILQMKTVSDNSETKEVSHSLVKQVPTLKTKSNAGTNSFLPLYNKKTYYLPSIG
SDEVGTGDVFGPVIVCCVYLTAKNIVFLQKLGTIAESKKISDEKIMQLAPLIMKEVIYSV
KIMMPLEYNQTIKQCNLNKIKALMHNEAIKQTVLKVSPNVPVILDQFCFPKNYFNYLQDQ
KAQNEIYTKIIFETKADSSYFSVAVASVIARYLFLTQIAKLSKQINSKLQLGAGKLVDLQ
IDLIVKQHGLEILPQIAKCNFKNIVRKME
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaattatagtttcaaattgaacaacaatcaagtagcaacaattaaaaaattctac
tacaaacaattaaaattatcacctaataaaacggttgcttttgttatagatgaatctttg
gctaaaataacagtttataataacggaactttgttagtgcaagggaaaaataccttatct
atcgttgcttttattaaaaaaatattgcaaatgaaaacagttagcgataatagcgaaaca
aaagaagttagccattcattagtcaaacaagtcccaacgttaaaaactaaaagcaatgca
gggacaaattcatttttgccactttataacaaaaaaacttattatcttccatccattggt
tctgatgaagtaggtacaggagatgtttttggtcctgttattgtttgttgtgtttacttg
actgctaaaaatattgtttttttgcaaaaattaggaactattgccgaatccaaaaaaatc
tcagatgaaaaaataatgcagctagctcctttaattatgaaagaagttatttattctgtt
aaaataatgatgcctttagaatacaatcaaacaatcaaacaatgtaatctcaacaaaatt
aaggctttaatgcataacgaagcaattaagcaaaccgttttaaaagtttctccaaatgtt
cctgtcattttggatcagttttgttttcctaaaaattattttaattatttgcaagaccaa
aaagcccaaaatgagatttatacaaagattatttttgaaactaaggctgatagttcttat
tttagtgttgctgtggcttctgttattgctagatatctttttttaacacaaatagcaaaa
ctttctaagcaaattaattccaaattgcaattaggagcaggcaaattggtagatttgcaa
attgatttgatagtaaaacaacacggattagagattttgcctcaaattgctaagtgtaat
tttaaaaatattgtgcgcaaaatggaataa
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