Marinobacter sp. BSs20148: MRBBS_0382
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Entry
MRBBS_0382 CDS
T02323
Symbol
gabD
Name
(GenBank) Succinate-semialdehyde dehydrogenase [NADP+] GabD
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
mbs
Marinobacter sp. BSs20148
Pathway
mbs00250
Alanine, aspartate and glutamate metabolism
mbs00310
Lysine degradation
mbs00350
Tyrosine metabolism
mbs00650
Butanoate metabolism
mbs00760
Nicotinate and nicotinamide metabolism
mbs01100
Metabolic pathways
mbs01120
Microbial metabolism in diverse environments
Module
mbs_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
mbs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
MRBBS_0382 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
MRBBS_0382 (gabD)
00310 Lysine degradation
MRBBS_0382 (gabD)
00350 Tyrosine metabolism
MRBBS_0382 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
MRBBS_0382 (gabD)
Enzymes [BR:
mbs01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
MRBBS_0382 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
MRBBS_0382 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
MRBBS_0382 (gabD)
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Motif
Pfam:
Aldedh
Ldh_2
Motif
Other DBs
NCBI-ProteinID:
AFP29320
UniProt:
M1F9F1
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All DBs
Position
complement(404011..405480)
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AA seq
489 aa
AA seq
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MSIELKNPELLRNRAYINGQWTAARSGKTFEVTNPANGEHLATVPDMDETDTRIAIESAE
AAWPAWRSTPAKERAKILRKWFELLMENQEDLARLMTAEQGKPLAESRGEVGYGASFIEW
FAEEAKRAYGDVIPSHGKDKRILVIKQPVGVVAAITPWNFPIAMITRKVAPALAAGCPVV
VKPAEDTPLSALAITALAEQAGVPAGLINIVTCSKPNAAAVGGELTGNPVVRKISFTGST
PVGKLLMRQASDTVKKVSLELGGNAPFIVFDDADLDAAVIGLMASKYRNTGQTCVCANRV
YVQSGVYDAFAEKLKVAVSKMVVGAGLDGDTQQGPLINKAALDKVKRHIADATSKGAKII
LGGQPHALGGTFFEPTILIDATQDMLIASEETFGPVAPLFRFETEEEAIAMANDSAFGLS
AYFYSNNIHRVWHVAEALESGMVGINEGIISTEVAPFGGVKESGLGREGSHYGLDEYMEL
KYLCLGGMR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgtctatcgagcttaagaatccagaacttctgcgcaatcgcgcctatattaatggccag
tggacagcggcacgttccggcaagaccttcgaggttaccaatccggccaacggcgagcac
ctagcgactgttccggacatggacgaaacagacacccgtatagccattgagtctgctgag
gcggcatggccagcctggcgttccacaccggccaaagaacgagccaagatcctgcggaag
tggttcgagctcttgatggaaaatcaggaagatctagcccgcctgatgaccgcagagcag
ggcaaacccctggctgaatcccgcggtgaagtcggctacggagccagttttatcgaatgg
ttcgcagaggaggccaagcgcgcttatggagacgtcattcccagccacggcaaggacaag
cgcatcctcgtgatcaaacagccggttggagtagttgccgcgattacaccctggaacttt
ccgatagccatgattaccagaaaggtcgcaccagcgctcgctgcgggctgtccggttgtg
gtcaagcctgcagaagatacgccgctatccgcactagctatcacagcacttgcggaacaa
gcaggcgtgccggccggtctgatcaatattgttacctgttcaaaacccaatgcggcggca
gtcggtggggaattaacgggcaaccccgttgtccgcaaaatatccttcaccggctccaca
cccgttggcaagttattgatgcgccaggccagcgataccgtcaagaaagtcagcttggaa
ctggggggcaacgcaccgttcattgtttttgacgatgcagaccttgatgcagctgtcatc
gggctgatggcatccaaataccgcaacaccgggcaaacctgtgtgtgtgcaaaccgggtg
tatgtccaatctggtgtttacgatgcctttgccgaaaaactgaaagttgctgttagcaaa
atggtggtgggcgccggcctggacggtgatacacaacaagggccgctgatcaacaaagca
gcgctggataaggtgaagcggcacattgctgatgccacttccaagggcgccaaaattatt
ctcggtggacagccgcatgcactgggaggcactttttttgagcctaccattcttatcgac
gccactcaggacatgctgatcgctagcgaagaaacctttggtccggttgcccctttgttc
cggtttgagaccgaagaggaagccattgccatggccaacgattcagcgtttggtctttct
gcttatttttacagcaataacattcaccgggtctggcatgtcgcggaagcacttgagtcc
ggtatggtaggaattaatgaaggcattatctccaccgaagtggccccattcggcggtgtc
aaagagagtggtttgggccgcgaaggctctcactacggtctggacgagtatatggaactt
aaatacctctgccttggcggtatgcgctaa
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