Marinobacter sp. BSs20148: MRBBS_2142
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Entry
MRBBS_2142 CDS
T02323
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
mbs
Marinobacter sp. BSs20148
Pathway
mbs03030
DNA replication
mbs03430
Mismatch repair
mbs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mbs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MRBBS_2142 (holB)
03430 Mismatch repair
MRBBS_2142 (holB)
03440 Homologous recombination
MRBBS_2142 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mbs03032
]
MRBBS_2142 (holB)
03400 DNA repair and recombination proteins [BR:
mbs03400
]
MRBBS_2142 (holB)
Enzymes [BR:
mbs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MRBBS_2142 (holB)
DNA replication proteins [BR:
mbs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MRBBS_2142 (holB)
DNA repair and recombination proteins [BR:
mbs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MRBBS_2142 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AFP31079
UniProt:
M1FFZ9
LinkDB
All DBs
Position
complement(2264284..2265264)
Genome browser
AA seq
326 aa
AA seq
DB search
MQKQLKESRLPHALIINGERGVGKRAWADAVAALLLCDQLQTDPQGMPQACGHCKQCELK
RAGSHPDVRVYAPEKSRMVRIVQIRELINFASASPQVGHRKIAIIDRADQLNINAANALL
KTLEEPSGDTVLLLLQESGRPLLPTIRSRCQTHTLPVPVAADAERWLVGQLALLPPENQP
DSTSVAKALMLAGNAPRLALDYLNSGFIALHDAAFCGFRDFMKNQVTLADAAKAFKALGL
DETLWLFEGWAADLARLSAGGEPAHHEAADMLRFLAGCNPPWRAHELLGMVREGREAVVY
NANPELEASRLLLAWQQLMPKRQRAG
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
gtgcagaaacagctgaaggagtcgcggctgccacacgcactgattattaatggcgagcgc
ggtgttggtaaacgtgcctgggcagatgcggttgccgctttgttgctgtgtgatcagctg
caaacagacccgcagggaatgccccaagcctgtggccactgcaaacagtgtgaattgaaa
cgtgccggcagccatcccgatgtgcgggtatacgcccctgaaaaatcgcgcatggtgcgc
attgttcaaatcagggaattgattaattttgcttctgcgtcacctcaggtaggtcatcgt
aaaatcgcgattatcgatcgcgccgaccagctcaatatcaacgctgccaatgccttgctg
aaaactctggaagaacccagcggtgataccgtgctgttgctgttacaggaaagcggccgg
ccgttgttgccgacgattcgctcgcgctgtcagactcatacgttgccggtacccgtggca
gctgacgccgaacgctggctggtgggccaactggctctgctaccacctgaaaatcagcca
gatagcacttcggtggcgaaagcgttgatgttggctggcaatgccccgaggctggctttg
gattatctgaacagcggcttcatagcgctgcatgacgcggctttttgcggttttcgcgat
ttcatgaaaaaccaggtgaccctggccgatgctgccaaagccttcaaagcccttgggctt
gatgaaaccctgtggctgtttgaaggctgggcggcagatctggctcggctgagcgccggg
ggtgagccggcgcaccacgaagccgcggacatgctgcgcttcctggccggctgcaatccg
ccctggcgcgcccatgaattgctgggcatggtgcgtgaagggcgtgaagccgttgtatac
aatgccaacccggagctggaagccagccggctgctgctggcgtggcaacaactgatgccc
aaacgacagcgtgccggttga
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