KEGG   Mycobacterium tuberculosis variant bovis BCG Tokyo 172: JTY_1426
Entry
JTY_1426          CDS       T00864                                 
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
mbt  Mycobacterium tuberculosis variant bovis BCG Tokyo 172
Pathway
mbt03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mbt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    JTY_1426 (rpoZ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mbt03021]
    JTY_1426 (rpoZ)
   03400 DNA repair and recombination proteins [BR:mbt03400]
    JTY_1426 (rpoZ)
Enzymes [BR:mbt01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     JTY_1426 (rpoZ)
Transcription machinery [BR:mbt03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     JTY_1426 (rpoZ)
DNA repair and recombination proteins [BR:mbt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      JTY_1426 (rpoZ)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: BAH25714
UniProt: C1AN35
LinkDB
Position
1563139..1563471
AA seq 110 aa
MSISQSDASLAAVPAVDQFDPSSGASGGYDTPLGITNPPIDELLDRVSSKYALVIYAAKR
ARQINDYYNQLGEGILEYVGPLVEPGLQEKPLSIALREIHADLLEHTEGE
NT seq 333 nt   +upstreamnt  +downstreamnt
gtgagtatctcgcagtccgacgcgtcgttggccgccgtccccgccgtggatcagttcgat
ccgtcgtcaggtgcatcaggtggctacgacaccccgctgggcatcaccaatccgcccatc
gacgagttgctggaccgcgtctcgagcaaatacgccctcgtgatctatgcggcaaagcgt
gcccggcagatcaacgactactacaaccagcttggcgagggcatcctcgaatatgtcggt
ccgctggttgagccggggttgcaagagaagccgttgtccatcgcgttgcgcgagatccac
gccgatctgctcgagcacaccgagggcgagtag

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