Mycobacterium tuberculosis variant bovis BCG Tokyo 172: JTY_3705
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Entry
JTY_3705 CDS
T00864
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mbt
Mycobacterium tuberculosis variant bovis BCG Tokyo 172
Brite
KEGG Orthology (KO) [BR:
mbt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mbt03032
]
JTY_3705 (topA)
03400 DNA repair and recombination proteins [BR:
mbt03400
]
JTY_3705 (topA)
Enzymes [BR:
mbt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JTY_3705 (topA)
DNA replication proteins [BR:
mbt03032
]
Prokaryotic type
DNA Topoisomerases
JTY_3705 (topA)
DNA repair and recombination proteins [BR:
mbt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JTY_3705 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
DUF2092
Motif
Other DBs
NCBI-ProteinID:
BAH27977
LinkDB
All DBs
Position
complement(4054725..4057529)
Genome browser
AA seq
934 aa
AA seq
DB search
MADPKTKGRGSGGNGSGRRLVIVESPTKARKLASYLGSGYIVESSRGHIRDLPRAASDVP
AKYKSQPWARLGVNVDADFEPLYIISPEKRSTVSELRGLLKDVDELYLATDGDREGEAIA
WHLLETLKPRIPVKRMVFHEITEPAIRAAAEHPRDLDIDLVDAQETRRILDRLYGYEVSP
VLWKKVAPKLSAGRVQSVATRIIVARERDRMAFRSAAYWDILAKLDASVSDPDAAPPTFS
ARLTAVAGRRVATGRDFDSLGTLRKGDEVIVLDEGSATALAAGLDGTQLTVASAEEKPYA
RRPYPPFMTSTLQQEASRKLRFSAERTMSIAQRLYENGYITYMRTDSTTLSESAINAART
QARQLYGDEYVAPAPRQYTRKVKNAQEAHEAIRPAGETFATPDAVRRELDGPNIDDFRLY
ELIWQRTVASQMADARGMTLSLRITGMSGHQEVVFSATGRTLTFPGFLKAYVETVDELVG
GEADDAERRLPHLTPGQRLDIVELTPDGHATNPPARYTEASLVKALEELGIGRPSTYSSI
IKTIQDRGYVHKKGSALVPSWVAFAVTGLLEQHFGRLVDYDFTAAMEDELDEIAAGNERR
TNWLNNFYFGGDHGVPDSVARSGGLKKFVGINLEGIDAREVNSIKLFDDTHGRPIYVRVG
KNGPYLERLVAGDTGEPTPQRANLSDSITPDELTLQVAEELFATPQQGRTLGLDPETGHE
IVAREGRFGPYVTEILPEPAADAAAAAQGVKKRQKAAGPKPRTGSLLRSMDLQTVTLEDA
LRLLSLPRVVGVDPASGEEITAQNGRYGPYLKRGNDSRSLVTEDQIFTITLDEALKIYAE
PKRRGRQSASAPPLRELGTDPASGKPMVIKDGRFGPYVTDGETNASLRKGDDVASITDER
AAELLADRRARGPAKRPARKAARKVPAKKAAKRD
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
ttggctgacccgaaaacgaagggccgtggcagcggcggcaatggcagcggccggcgactg
gtcatcgtcgagtcgcccaccaaggcgcgcaagctggcctcctacctgggctctggctac
atcgtcgagtcctcccgggggcacatccgtgacttgccgcgggccgcgtcggatgtaccc
gcaaagtacaagtcgcagccgtgggcgcggctcggggtcaacgtcgacgccgacttcgaa
ccgctctacatcatcagcccggagaaacggagcaccgtcagcgagctcaggggcctgctc
aaagacgtggacgagctgtatctggccacggatggggaccgtgagggcgaagctattgcc
tggcatctgctggaaaccctcaaaccgcgcataccggtaaagcggatggtcttccacgag
atcaccgaaccggcgatccgcgccgccgccgagcacccccgcgacctagacatcgacctg
gtcgacgcgcaggagacccggcgcatcctggaccggctgtacggctacgaagtcagccca
gtgctgtggaagaaggtcgcccccaagttgtcggcgggccgggtgcagtcggtggccacc
cgcatcatcgtggcgcgcgaacgcgaccgcatggcgttccgcagcgcggcctactgggac
atccttgccaagctggatgccagcgtgtccgacccggacgccgcgccgcccaccttcagc
gcccggctgacggccgtggctggccggcgggtggccactggccgcgatttcgactcgctg
ggcacgctgcgcaaaggcgacgaagtcattgtgctcgacgaggggagcgcgaccgcgttg
gccgcgggcctggatggcacgcagctgaccgtggcctcggccgaggagaagccctacgcc
cggcgcccgtacccgccgttcatgacctccacgctgcagcaagaggccagccgcaagctg
cggttctccgccgagcggacgatgagcatcgcccagcggctgtacgaaaacggctacatc
acctatatgcgtaccgactccaccacgctgtcggagtcggcgatcaacgccgcacgtacc
caggcgcgccagctctacggcgacgagtacgtcgcgccggcgccgcgccaatacacccgc
aaggtgaagaacgcccaggaagcgcacgaggctatccggcccgccggtgaaacgtttgcc
accccggacgcggtgcgtcgcgaactcgacggtcccaacattgatgatttccggctctat
gagctgatttggcaacgcaccgtagcctcgcagatggccgatgcgcggggcatgacgctg
agcctgcggatcactggcatgtcggggcaccaggaggtggtgttctccgcgaccggacgc
accttgacgttcccgggcttcctcaaggcctacgtggagaccgtggacgagctggtcggc
ggcgaggctgacgatgccgagcggcgactgccccatctgaccccgggtcaacggttggac
atcgtcgagttgaccccagacggccatgccaccaacccgccggcccgctacaccgaggcg
tcgctggtcaaagcgctcgaggagctgggcatcggccgcccgtcgacctactcgtcgatc
atcaagaccatccaggatcgcggctacgtgcacaagaagggcagtgcactggtgccgtca
tgggtggcgttcgcggtaaccggtctgctcgagcagcatttcggtcggctcgtcgactac
gacttcaccgcggcgatggaagacgagctcgacgagatcgccgccggcaacgagcgccgc
accaactggctcaacaacttctactttggtggcgatcacggtgtgcccgattcggtagcc
cgatcgggtggcctcaagaagtttgtcgggatcaatctcgagggcatcgacgcacgagaa
gtaaactctatcaagctttttgacgacacccacggacgccccatatatgttcgggtgggc
aagaacggtccctacctggaacgtttggtggccggcgacaccggtgagcccacgccgcag
cgggccaacctcagcgactcgattaccccggacgagctgactctacaggtggccgaagag
ctctttgccacaccgcaacagggacggactttgggcttggacccagaaaccggccacgag
atcgtggccagggaaggccggtttgggccgtatgtgaccgagatcctgccggagcctgcg
gctgatgcggccgcggccgctcagggagtcaagaaacgccagaaggccgccgggcccaaa
ccgcgcaccggttcgttgctgcggagcatggacctacagacggtcaccctcgaagacgcg
ctgaggctgctgtcactgccgcgcgtggtcggagtggaccccgcctcgggtgaggagatc
accgcgcagaacgggcgctacggaccgtatctaaagcgcggcaacgattctcgatcactg
gtcaccgaagaccagatattcaccatcacgctcgacgaagccctgaagatctacgcagag
ccgaaacgtcgtggccggcaaagcgcttcggctccgccgctgcgcgagctgggaacagat
ccggcgtcgggcaagccaatggtcatcaaggacggccgattcgggccgtacgtcaccgac
ggtgagaccaatgccagcctgcgtaagggcgacgacgtggcttccataaccgacgagcgc
gccgccgagctgttggccgatcgccgagcccggggtccggcaaaacggccagccaggaaa
gctgcccggaaggtgccggcgaagaaggcagccaagcgcgactag
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